Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079145.1_202017-03- 21] 17 sequences; 12,214,669 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq14 114 1e-20 >seq14 Length=872155 Score = 114 bits (126), Expect = 1e-20 Identities = 166/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| | |||| ||| ||||| || | |||||||| |||||||||||||||||| Sbjct 57114 CCACCTCTCAATCTCAAGACCAAGTGAAGAGTAGACTCCTTTTGAATATTGTAATCGGAT 57173 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | ||| | ||| || || ||||| || || | ||||||| ||| || || ||||| Sbjct 57174 AACGTTCTGCCATCTTCCAGTTGTTTACCGGCAAAAATCAATCTCTGTTGGTCTGGAGGA 57233 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTG-CTTGA-GTTGTTCGACGGTGTCCGTACTCTCGA 127064 || || ||||| | | ||| ||| || ||||| |||| |||| ||||| | | |||| Sbjct 57234 ATACCTTCCTTAT-CTTGAATTTTTGACTTGACGTTG-TCGATCGTGTCGGAAGATTCGA 57291 Query 127065 CTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 | || | || | || || || ||||| || || ||||| |||||||| Sbjct 57292 CCTCCAGAGTAATAGTCTTACCAGTCAGCGTCTTGACAAAGATCTGCAT 57340 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475500698956080