Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079145.1_202017-03-
21] 17 sequences; 12,214,669 total letters
Query= NC_012639.1
Length=141291
Score E
Sequences producing significant alignments: (Bits) Value
seq14 143 2e-29
seq12 118 1e-21
seq5 86.0 6e-12
seq11 84.2 2e-11
>seq14
Length=872155
Score = 143 bits (158), Expect = 2e-29
Identities = 163/216 (75%), Gaps = 2/216 (1%)
Strand=Plus/Plus
Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185
|||| ||||| ||||| || ||||| || || || |||||||| | ||| || |
Sbjct 56898 CTCAGCACTAAATGCAAAGTAGATTCTTTCTGAATGTTATAATCAGACAGCGTTCTACCA 56957
Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245
|| |||| ||| || || || | ||||||| || ||||| || ||||| ||||||||
Sbjct 56958 TCTTCCAGTTGCTTACCGGCAAAAATCAATCTCTGTTGGTCTGGAGGAATACCTTCTTTG 57017
Query 45246 TCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAAC 45304
|| ||||||||| |||| || | || | ||||||||||| || || || || || |
Sbjct 57018 TCCTGAATTTTTGACTTGA-CGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTAT 57076
Query 45305 CGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|||||||| ||||||||||| ||||||||||||||
Sbjct 57077 AGTTTTGCCAGTTAGAGTTTTGACAAAAATTTGCAT 57112
Score = 131 bits (144), Expect = 2e-25
Identities = 160/216 (74%), Gaps = 2/216 (1%)
Strand=Plus/Plus
Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185
||||| || | || || || || |||||||| ||||| |||||| | ||| | |
Sbjct 57126 CTCAAGACCAAGTGAAGAGTAGACTCCTTTTGAATATTGTAATCGGATAACGTTCTGCCA 57185
Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245
|| |||| |||||| || || | ||||||| || ||||| || ||||| ||||| |||
Sbjct 57186 TCTTCCAGTTGTTTACCGGCAAAAATCAATCTCTGTTGGTCTGGAGGAATACCTTCCTTA 57245
Query 45246 TCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAAC 45304
|||||||||||| |||| || | || | ||||||||||| ||||| || |||||||
Sbjct 57246 TCTTGAATTTTTGACTTGA-CGTTGTCGATCGTGTCGGAAGATTCGACCTCCAGAGTAAT 57304
Query 45305 CGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| || || || || || || ||||| || |||||
Sbjct 57305 AGTCTTACCAGTCAGCGTCTTGACAAAGATCTGCAT 57340
Score = 125 bits (138), Expect = 6e-24
Identities = 159/216 (74%), Gaps = 2/216 (1%)
Strand=Plus/Plus
Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185
|||| ||||| ||||| || ||||| || || || |||||||| | ||| || |
Sbjct 57354 CTCAGCACTAAATGCAAGGTAGATTCTTTCTGAATGTTATAATCAGACAGTGTTCTACCA 57413
Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245
|| |||| ||| || || || | ||||| | || ||||| || ||||| ||||||||
Sbjct 57414 TCTTCCAGTTGCTTACCGGCAAAAATCAACCTCTGTTGGTCTGGAGGAATACCTTCTTTG 57473
Query 45246 TCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAAC 45304
|| ||||||||| |||| || | || | ||| || ||||| |||||||| | || |
Sbjct 57474 TCCTGAATTTTTGACTTGA-CGTTATCAATGGTATCAGAAGATTCGACTTCCAATGTTAT 57532
Query 45305 CGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
||||| ||||| | ||| || ||||||||||||||
Sbjct 57533 GGTTTTACCGGTCAAAGTCTTGACAAAAATTTGCAT 57568
Score = 123 bits (136), Expect = 2e-23
Identities = 159/217 (73%), Gaps = 2/217 (1%)
Strand=Plus/Plus
Query 45125 CCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGA 45184
||| || || || || || || ||||||||||| || || || ||| | ||| ||
Sbjct 56669 CCTTAAGACCAGGTGGAGAGTAGATTCCTTTTGAATGTTGTAGTCGGATAATGTTCTACC 56728
Query 45185 ATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTT 45244
||| |||| |||||| || || | ||||||| || ||||| || ||||| ||||| ||
Sbjct 56729 ATCTTCCAGTTGTTTACCGGCAAAAATCAATCTCTGTTGGTCTGGAGGAATACCTTCCTT 56788
Query 45245 ATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAA 45303
||||||||||||| |||| || | || | ||||||||||| ||||| ||||| || |
Sbjct 56789 ATCTTGAATTTTTGACTTGA-CGTTGTCAATAGTGTCGGAAGATTCGACCTCGAGGGTTA 56847
Query 45304 CCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| || || || || || || || || || |||||
Sbjct 56848 TAGTCTTACCAGTCAGCGTCTTAACGAAGATCTGCAT 56884
>seq12
Length=1068413
Score = 118 bits (130), Expect = 1e-21
Identities = 186/264 (70%), Gaps = 7/264 (3%)
Strand=Plus/Minus
Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185
||||| || | |||| || ||||| |||||||| || || || | |||| | |
Sbjct 493800 CTCAAGACCAAGTGCAAAGTGGATTCTTTTTGGATGTTGTAGTCAGACAAGGTTCTGCCA 493741
Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245
|| |||||||| || || || | ||||||| ||| ||||| || || || ||||| ||
Sbjct 493740 TCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTTG 493681
Query 45246 TCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACC 45305
||||| || || |||| || | ||||| ||||| || ||||| || ||||
Sbjct 493680 TCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCTAGGGTAATA 493621
Query 45306 GTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC---GC---GCGACCAATTTAATAA 45359
|| || ||||||| ||| || || |||||||||||| || || | || |||| ||
Sbjct 493620 GTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATCTTGGCTTGTCGGCAAAATTAA-AA 493562
Query 45360 TTTAACTCTTATTTTCTTACTAAG 45383
||||||| | |||||||| |||
Sbjct 493561 TTTAACTGCTTCTTTCTTACCAAG 493538
>seq5
Length=577572
Score = 86.0 bits (94), Expect = 6e-12
Identities = 206/312 (66%), Gaps = 0/312 (0%)
Strand=Plus/Plus
Query 122832 GATTACGAATACAAATATTTTGGATACAAAACGTTAGAAAACGGATATTTGaaaaaaaTC 122891
|||| | | |||| |||||||| | |||||| || ||| ||||| || ||||
Sbjct 305180 GATTTCCAGTACAGTTATTTTGGTTTCAAAACTTTGGAACGTTCTTATTTACTAAGAATC 305239
Query 122892 GAGGAAAAGGTCGCCGAACGTATTCAACATATGCTCATGCGCGTCGCTATAGGCGTGCAC 122951
| | | || ||||||||| ||||| | | ||| | ||||| | ||| | |||
Sbjct 305240 AACGGCCAAGTGGCCGAACGTCCACAACACTTAATTATGAGAGTCGCACTGGGCATCCAC 305299
Query 122952 GGACGCGACATCGAAAACGCGACCGAAACTTACGATTTGATGTCTCAAAAATTTTTCACG 123011
|| | ||||||||| || ||||| || | || ||||||| ||||| || ||
Sbjct 305300 GGTAGAGACATCGAAGCTGCTCTAGAAACATATAACTTAATGTCTCTAAAATACTTTACT 305359
Query 123012 CACGCGAGTCCCACTTTGTTCGCCGCCGGCACGAAGTTGCCTCAGTTGTCTTCGTGTTTT 123071
|| || ||| |||||||| || || || ||||| |||| || |||||
Sbjct 305360 CATGCCTCTCCAACTTTGTTTAATGCTGGTACTCCAAAACCTCAAATGTCCTCTTGTTTC 305419
Query 123072 TTGCTCACCTTGCGCGAAGACAGCATCACCGGTATCTATGAAACTTTGCGCGATTGCGCG 123131
||| || || || || ||| ||| ||||| || || |||||| || || ||
Sbjct 305420 TTGGTCGCCATGAAGGAGGACTCTATCGAGGGTATTTACGACACTTTGAAAGAATGTGCT 305479
Query 123132 TTGATTTCCAAA 123143
||||||||||||
Sbjct 305480 TTGATTTCCAAA 305491
>seq11
Length=805821
Score = 84.2 bits (92), Expect = 2e-11
Identities = 142/206 (69%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185
||||| || | ||| | || |||||||||||||| || || || | ||| ||
Sbjct 742739 CTCAAAACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGATAAAGTTCTACCG 742798
Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245
|| |||||||| || || || | ||||||| ||| ||||| || || || ||||| ||
Sbjct 742799 TCTTCCAATTGCTTACCGGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTTG 742858
Query 45246 TCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACC 45305
||||| || || |||| || | |||||| ||||| || ||||| | ||| |
Sbjct 742859 TCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCAACTTCTAAAGTGATG 742918
Query 45306 GTTTTGCCGGTTAGAGTTTTTACAAA 45331
|| || || || | ||| || || ||
Sbjct 742919 GTCTTACCAGTCAAAGTCTTAACGAA 742944
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 452003103949320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |