Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079145.1_202017-03-
21] 17 sequences; 12,214,669 total letters
Query= NC_013756.1
Length=368454
Score E
Sequences producing significant alignments: (Bits) Value
seq14 114 3e-20
seq15 105 2e-17
seq12 96.9 8e-15
seq11 95.1 3e-14
>seq14
Length=872155
Score = 114 bits (126), Expect = 3e-20
Identities = 153/213 (72%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473
||||| ||| | ||| ||||| ||||||||||| | ||||| || | || || || ||
Sbjct 57125 TCTCAAGACCAAGTGAAGAGTAGACTCCTTTTGAATATTGTAATCGGATAACGTTCTGCC 57184
Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533
||||||||| || || ||||| || || | | ||| ||||| ||| ||| |||||
Sbjct 57185 ATCTTCCAGTTGTTTACCGGCAAAAATCAATCTCTGTTGGTCTGGAGGAATACCTTCCTT 57244
Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593
|| ||||| ||| ||| ||| |||| ||||| | | ||| || |||| || ||
Sbjct 57245 ATCTTGAATTTTTGACTTGACGTTGTCGATCGTGTCGGAAGATTCGACCTCCAGAGTAAT 57304
Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|||||||| || || || || ||||| || ||
Sbjct 57305 AGTCTTACCAGTCAGCGTCTTGACAAAGATCTG 57337
Score = 109 bits (120), Expect = 1e-18
Identities = 152/213 (71%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473
|||||| || | || | ||| || || || || | ||| || |||| || || || ||
Sbjct 56897 TCTCAGCACTAAATGCAAAGTAGATTCTTTCTGAATGTTATAATCAGACAGCGTTCTACC 56956
Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533
||||||||| ||||| ||||| || || | | ||| ||||| ||| ||| ||||||
Sbjct 56957 ATCTTCCAGTTGCTTACCGGCAAAAATCAATCTCTGTTGGTCTGGAGGAATACCTTCTTT 57016
Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593
|||||||| ||| ||| ||| || | ||||| | | ||| || || | || ||
Sbjct 57017 GTCCTGAATTTTTGACTTGACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTAT 57076
Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| || || || |||||||| |||||||||||
Sbjct 57077 AGTTTTGCCAGTTAGAGTTTTGACAAAAATTTG 57109
Score = 109 bits (120), Expect = 1e-18
Identities = 152/213 (71%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473
|||||| || | || | || || || || || | ||| || |||| || || || ||
Sbjct 57353 TCTCAGCACTAAATGCAAGGTAGATTCTTTCTGAATGTTATAATCAGACAGTGTTCTACC 57412
Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533
||||||||| ||||| ||||| || || | | ||| ||||| ||| ||| ||||||
Sbjct 57413 ATCTTCCAGTTGCTTACCGGCAAAAATCAACCTCTGTTGGTCTGGAGGAATACCTTCTTT 57472
Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593
|||||||| ||| ||| ||| || | ||| || | | ||| || ||||| || ||
Sbjct 57473 GTCCTGAATTTTTGACTTGACGTTATCAATGGTATCAGAAGATTCGACTTCCAATGTTAT 57532
Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| ||||| || | ||| || |||||||||||
Sbjct 57533 GGTTTTACCGGTCAAAGTCTTGACAAAAATTTG 57565
Score = 107 bits (118), Expect = 5e-18
Identities = 148/207 (71%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 199420 GACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTC 199479
||| ||||||||||| || |||||||| | ||||||||| | || || || ||||||||
Sbjct 56675 GACCAGGTGGAGAGTAGATTCCTTTTGAATGTTGTAGTCGGATAATGTTCTACCATCTTC 56734
Query 199480 CAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTG 199539
||| || || ||||| || || | | ||| ||||| ||| ||| ||||| || ||
Sbjct 56735 CAGTTGTTTACCGGCAAAAATCAATCTCTGTTGGTCTGGAGGAATACCTTCCTTATCTTG 56794
Query 199540 AATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTT 199599
||| ||| ||| ||| || | ||||| | | ||| || || | || || |||||
Sbjct 56795 AATTTTTGACTTGACGTTGTCAATAGTGTCGGAAGATTCGACCTCGAGGGTTATAGTCTT 56854
Query 199600 ACCCGTGAGAGTTTTCACAAAAATTTG 199626
||| || || || || || || || ||
Sbjct 56855 ACCAGTCAGCGTCTTAACGAAGATCTG 56881
>seq15
Length=1201643
Score = 105 bits (116), Expect = 2e-17
Identities = 148/208 (71%), Gaps = 0/208 (0%)
Strand=Plus/Minus
Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473
||||| ||| | ||| | ||| || || ||||| | ||||||||||| ||| || || ||
Sbjct 71294 TCTCAAGACTAAGTGTAAAGTGGATTCTTTTTGAATGTTGTAGTCAGACAAGGTTCTACC 71235
Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533
||||||| ||||| || || ||||| | | || ||||| || || |||||
Sbjct 71234 GTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTT 71175
Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593
|| ||||||||| ||| || || | ||||| | | ||| || ||||| |||||
Sbjct 71174 GTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGAT 71115
Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAA 199621
|||||||| || | ||| || ||||||
Sbjct 71114 GGTCTTACCAGTCAAAGTCTTGACAAAA 71087
>seq12
Length=1068413
Score = 96.9 bits (106), Expect = 8e-15
Identities = 149/213 (70%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473
||||| ||| | ||| | ||| || || ||||||| ||||||||||| ||| || || ||
Sbjct 493801 TCTCAAGACCAAGTGCAAAGTGGATTCTTTTTGGATGTTGTAGTCAGACAAGGTTCTGCC 493742
Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533
|||||||| ||||| || || ||||| | | || ||||| || || |||||
Sbjct 493741 ATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTT 493682
Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593
|| || ||||| ||| || || | ||||| | | ||| || || | || ||
Sbjct 493681 GTCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCTAGGGTAAT 493622
Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|||||||| || | ||| || || ||||||||
Sbjct 493621 AGTCTTACCGGTTAAAGTCTTGACGAAAATTTG 493589
>seq11
Length=805821
Score = 95.1 bits (104), Expect = 3e-14
Identities = 145/207 (70%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473
||||| || | || | ||| || |||||||||| ||||||||||| ||||| || ||
Sbjct 742738 TCTCAAAACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGATAAAGTTCTACC 742797
Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533
||||||| ||||| ||||| ||||| | | || ||||| || || |||||
Sbjct 742798 GTCTTCCAATTGCTTACCGGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTT 742857
Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593
|| || ||||| ||| || || | |||||| | | ||| || || || |||||
Sbjct 742858 GTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCAACTTCTAAAGTGAT 742917
Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAA 199620
|||||||| || | ||| || || ||
Sbjct 742918 GGTCTTACCAGTCAAAGTCTTAACGAA 742944
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1178921343216139
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |