Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079145.1_202017-03- 21] 17 sequences; 12,214,669 total letters Query= NC_013797.1 Length=108592 Score E Sequences producing significant alignments: (Bits) Value seq14 89.7 4e-13 >seq14 Length=872155 Score = 89.7 bits (98), Expect = 4e-13 Identities = 161/232 (69%), Gaps = 10/232 (4%) Strand=Plus/Plus Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552 || |||| ||| | ||| || ||||||||||| |||||| || || |||||||| | | Sbjct 56886 CCACCTCTCAATCTCAGCACTAAATGCAAAGTAGATTCTTTCTGAATGTTATAATCAGAC 56945 Query 39553 AAAACGCGTT----CATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGA 39608 | ||||| |||| |||| ||| || ||| ||||||| || | ||| || || | Sbjct 56946 A----GCGTTCTACCATCTTCCAGTTGCTTACCGGCAAAAATCAATCTCTGTTGGTCTGG 57001 Query 39609 GGGTACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCG-CTACTGTGTCTGCGCTTT 39667 || | ||||||||||| | | |||||| | ||| | | | ||||| | || Sbjct 57002 AGGAATACCTTCTTTGTC-CTGAATTTTTGACTTGACGTTGTCAATAGTGTCGGAAGATT 57060 Query 39668 CCACGTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719 | || || | || || ||||| || |||| |||||| || || || ||||| Sbjct 57061 CAACCTCTAGGGTTATAGTTTTGCCAGTTAGAGTTTTGACAAAAATTTGCAT 57112 Score = 82.4 bits (90), Expect = 5e-11 Identities = 157/231 (68%), Gaps = 8/231 (3%) Strand=Plus/Plus Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552 || |||| ||| | ||| || |||||||| || |||||| || || |||||||| | | Sbjct 57342 CCACCTCTCAATCTCAGCACTAAATGCAAGGTAGATTCTTTCTGAATGTTATAATCAGAC 57401 Query 39553 AAAACGCGTTC----ATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGA 39608 | | |||| ||| |||| ||| || ||| ||||||| || | ||| || || | Sbjct 57402 A----GTGTTCTACCATCTTCCAGTTGCTTACCGGCAAAAATCAACCTCTGTTGGTCTGG 57457 Query 39609 GGGTACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTC 39668 || | ||||||||||| |||||| || | | | | || || | ||| Sbjct 57458 AGGAATACCTTCTTTGTCCTGAATTTTTGACTTGACGTTATCAATGGTATCAGAAGATTC 57517 Query 39669 CACGTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719 || ||||| || || |||||||| || ||||| || || || || ||||| Sbjct 57518 GACTTCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACAAAAATTTGCAT 57568 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 347369528029361