Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079145.1_202017-03-
21] 17 sequences; 12,214,669 total letters
Query= NC_013797.1
Length=108592
Score E
Sequences producing significant alignments: (Bits) Value
seq14 89.7 4e-13
>seq14
Length=872155
Score = 89.7 bits (98), Expect = 4e-13
Identities = 161/232 (69%), Gaps = 10/232 (4%)
Strand=Plus/Plus
Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552
|| |||| ||| | ||| || ||||||||||| |||||| || || |||||||| | |
Sbjct 56886 CCACCTCTCAATCTCAGCACTAAATGCAAAGTAGATTCTTTCTGAATGTTATAATCAGAC 56945
Query 39553 AAAACGCGTT----CATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGA 39608
| ||||| |||| |||| ||| || ||| ||||||| || | ||| || || |
Sbjct 56946 A----GCGTTCTACCATCTTCCAGTTGCTTACCGGCAAAAATCAATCTCTGTTGGTCTGG 57001
Query 39609 GGGTACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCG-CTACTGTGTCTGCGCTTT 39667
|| | ||||||||||| | | |||||| | ||| | | | ||||| | ||
Sbjct 57002 AGGAATACCTTCTTTGTC-CTGAATTTTTGACTTGACGTTGTCAATAGTGTCGGAAGATT 57060
Query 39668 CCACGTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719
| || || | || || ||||| || |||| |||||| || || || |||||
Sbjct 57061 CAACCTCTAGGGTTATAGTTTTGCCAGTTAGAGTTTTGACAAAAATTTGCAT 57112
Score = 82.4 bits (90), Expect = 5e-11
Identities = 157/231 (68%), Gaps = 8/231 (3%)
Strand=Plus/Plus
Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552
|| |||| ||| | ||| || |||||||| || |||||| || || |||||||| | |
Sbjct 57342 CCACCTCTCAATCTCAGCACTAAATGCAAGGTAGATTCTTTCTGAATGTTATAATCAGAC 57401
Query 39553 AAAACGCGTTC----ATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGA 39608
| | |||| ||| |||| ||| || ||| ||||||| || | ||| || || |
Sbjct 57402 A----GTGTTCTACCATCTTCCAGTTGCTTACCGGCAAAAATCAACCTCTGTTGGTCTGG 57457
Query 39609 GGGTACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTC 39668
|| | ||||||||||| |||||| || | | | | || || | |||
Sbjct 57458 AGGAATACCTTCTTTGTCCTGAATTTTTGACTTGACGTTATCAATGGTATCAGAAGATTC 57517
Query 39669 CACGTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719
|| ||||| || || |||||||| || ||||| || || || || |||||
Sbjct 57518 GACTTCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACAAAAATTTGCAT 57568
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 347369528029361
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |