Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079145.1_202017-03- 21] 17 sequences; 12,214,669 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq5 136 5e-27 >seq5 Length=577572 Score = 136 bits (150), Expect = 5e-27 Identities = 771/1222 (63%), Gaps = 26/1222 (2%) Strand=Plus/Minus Query 109917 ATCCCACATATCTGGTTGAAGTACACCCTCAGCAGCAGGAGAACCCTTGAAACTCTCGTA 109976 |||||||||||| ||||||| ||| | || ||| |||||||| | ||| | ||||| Sbjct 306490 ATCCCACATATCGAACTGAAGTATACCTTGAGAAGCTGGAGAACCTTGGAAGGTTTCGTA 306431 Query 109977 CGACCCCTCAACCTCGGCCAACTCGGATGAAGCCTCTAGTGCCGCATGATACATAGTCTC 110036 | || || | || | || | ||||| || | | |||||||| || || || Sbjct 306430 TGGGCCGTCCTTTTGAGCTAGTTCACAAGAAGCTTCCATGGAGGCATGATAAATTGTTTC 306371 Query 110037 AAAAATATGAGCATTCATGAGGCGAGACTCTTCACAGTCGAAGGGAAGACCACAAAGAAT 110096 ||| || || ||| | | || | ||||||| | || ||||| | || | || Sbjct 306370 AAATATTTGGATATTTAGTAAACGGGCCTCTTCAGAATCAAAGGGTAAACGTAGCAACAT 306311 Query 110097 AAACACATCCGCTAGACCCTGAACACCGAGACCAATGGGGCGATGCTTCATGTTAGAGCG 110156 ||| || |||| ||| |||||||| | |||| || | ||| |||| || || | Sbjct 306310 AAAAGTGTCAGCTAAACCTTGAACACCCAAGGCAATTGGTCTATGTCTCATATTGGATCT 306251 Query 110157 TCGAGCAGTTTCTACGGGGTAAAAGTTGCGGTCGATGACCCGATTGAGATTCTTCGTCAC 110216 || || ||| || ||||| | || || || || || | || | ||| || || Sbjct 306250 TCTCGCTTCTTCAACAGGGTAGTAATTACGATCAATAACTCTGTTTAAATTACGAGTAAC 306191 Query 110217 AGTCTTCGTGATTTCATGGAGTTT------GTCGTAA-TCGAACGTTTT--CGTCTCCTT 110267 | || | ||||| || | ||| || |||| | ||| |||| |||| || Sbjct 306190 AACTTTGGCAATTTCGTGTAATTTTTTGAAGTTGTAAGTAGAA-GTTTGGCCGTCCTCTG 306132 Query 110268 A--TTGACATATTTG--GGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTT 110323 | || || | || | |||| || || | || || |||| ||| ||||| Sbjct 306131 ACGTTTCAATGAACGCTGGCAAGGCAACGGAAGCCAAGTTACAAACAGCAGTTTCGTCCG 306072 Query 110324 TGTCGGTGTATTCCAAAATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCT 110383 | | ||| || | |||||| || ||||| || ||| || ||||||||||| | Sbjct 306071 GAGCTGAGTACTCAACAATTTCACAGCATAAGTTTGATGACTTGATAACACCCAAGTTTT 306012 Query 110384 TCTGATTCGATTTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCG 110443 | || || || || |||||| ||||| ||||| | || | || ||||| ||||| | Sbjct 306011 TTTGGTTAGACTTTCTGTTGCAAGCATCTTTATAAACCACAAAAGGTGTACCCGTTTCAG 305952 Query 110444 TCTGTGACTTGAGAATGGCCTTCCATACATCGGCGGCGGGGACAGTTGCGTTAGCGAGAC 110503 | |||| | | ||||| | ||||| | || | || ||| | ||| Sbjct 305951 TTTGTGCTTCCAAAATGGAATACCATAATTTTTGAGCTTTAATGGTC---TTACCACGAC 305895 Query 110504 CTTCCTCCTCGTACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACACA-TCAGAAAGA 110562 |||| | ||||| ||| || | | ||||| || | ||||| ||| || ||| Sbjct 305894 CTTCTTTTTCGTAGCGGGTATATAGAGCTTCAAACTCGTCACCGTA-ACAGTCGCTTAGA 305836 Query 110563 CCCTTCGCCT-TGTCGGGACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCAT 110621 || || ||| || | |||| | | |||| | ||| ||| || || | |||||| Sbjct 305835 CCGGGAGCGGCTGTTGG-AGAGAACAAAGTCCAAGTCCCATTCTCTTCGACACGCTTCAT 305777 Query 110622 GAACAGGTCAGGAATCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACC 110681 ||| || ||||||||||||| || | || | || | |||| ||||| | ||| Sbjct 305776 GAAAAGATCAGGAATCCACAGAGCAGGAAACAAATCTCTTGCACGAATTTCTTCTTTACC 305717 Query 110682 TTGGTTGAGGCGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGAC 110741 ||||| | | || | ||| || | |||||| | ||||||||||| || || | Sbjct 305716 GTGGTTCTTTCTGATATCAATAAAATCAAAGATATCAGCATGCCATGGTTCCAGGTACAG 305657 Query 110742 AGCGATGGATCC----CTTACGACGACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGA 110797 ||| | || || ||| | ||| |||||| ||||| || || || ||| | Sbjct 305656 AGCAAAGGCACCAGGTCTTTTG-TTACCACCCTGGTCGACATAACGGGCGGTATTATTAA 305598 Query 110798 AGACCCTGAGCATAGGAATAATTCCATCGGATTGACCATTTGTACCCCTAATTCTGGACT 110857 | || | | ||| ||||| | || | || ||| |||||||| ||| || Sbjct 305597 AAACACGAATCATGGGAATTAACCCGTTAGAAGTACCGTTTGTACCAGCAATGTAAGAAC 305538 Query 110858 TATTGGCACGAATGTCGTGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTG 110917 | | | |||||||| |||||||| | |||||||||||| || || ||| | Sbjct 305537 CAGTTGAACGAATGTTATGGATATGTAGACCAATACCACCAGCAGTTTTGGAAATCAAAG 305478 Query 110918 CACACTCTGTGAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAA 110977 |||| ||| | | || | |||||||| || || || || |||| |||| | | | Sbjct 305477 CACATTCTTTCAAAGTGTCGTAAATACCCTCGATAGAGTCCTCCTTCATGGCGACCAAGA 305418 Query 110978 AGCAAGAAGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAA 111037 | ||||| ||||| ||||| || || || ||||| || | || || | |||||| Sbjct 305417 AACAAGAGGACATTTGAGGTTTTGGAGTACCAGCATTAAACAAAGTTGGAGAGGCATGAG 305358 Query 111038 TGAACAGACCTTGGGACATCTTGTTGTATGTGTCGAGTGCGGAGGGTACATCTTTACCGT 111097 | || | | ||||| ||| ||||| || || || | | ||| |||||| Sbjct 305357 TAAAGTATTTTAGAGACATTAAGTTATATGTTTCTAGAGCAGCTTCGATGTCTCTACCGT 305298 Query 111098 GAATACCAATGGCAACTCGCAT 111119 | || || | || |||| ||| Sbjct 305297 GGATGCCCAGTGCGACTCTCAT 305276 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588975874842600