Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079145.1_202017-03- 21] 17 sequences; 12,214,669 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq5 307 1e-78 seq15 242 4e-59 seq10 82.4 9e-11 >seq5 Length=577572 Score = 307 bits (340), Expect = 1e-78 Identities = 905/1381 (66%), Gaps = 34/1381 (2%) Strand=Plus/Minus Query 105953 GGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCC 106012 |||||||| |||||||||| |||||| ||||| | ||||| || || |||||||||||| Sbjct 306630 GGTTCAAAACATTCATTATAACCCAATATTTGGGATGTGGATGCGGTAGGCATTGGTGCC 306571 Query 106013 ATCA--AAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTCCTTGAGAACATCCCAGT 106070 || ||||| ||| | || ||| | || | |||| || | | | | ||||| | Sbjct 306570 ATGGTCAAAGA--GTTTCTAATACCATGTTTCATGATATCTTTCCTCAAAGTGTCCCAAT 306513 Query 106071 CGTAGTTGAGCTTGGTTTCACCTTCCCACATATCAAATTGAAGCACCCCTTGGGACGTGG 106130 | | || | || || ||||||||||| || ||||| | ||||| || | | Sbjct 306512 CCCACATGCCGTAGGGTTTTTGATCCCACATATCGAACTGAAGTATACCTTGAGAAGCTG 306453 Query 106131 GAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTCCA 106190 ||||||| | || || || || | || | || ||| | |||||| || |||| Sbjct 306452 GAGAACCTTGGAAGGTTTCGTATGGGCCGTCCTTTTGAGCTAGTTCACAAGAAGCTTCCA 306393 Query 106191 GGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAAT 106250 ||| || ||||| || |||||||| || | ||| | ||| || || |||| Sbjct 306392 TGGAGGCATGATAAATTGTTTCAAATATTTGGATATTTAGTAAACGGGCCTCTTCAGAAT 306333 Query 106251 CAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAG 106310 |||| | | || ||| ||||| || || | ||||||||||||||| |||| | Sbjct 306332 CAAAGGGTAAACGTAGCAACATAAAAGTGTCAGCTAAACCTTGAACACCCAAGGCAATTG 306273 Query 106311 GTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACGGGATAAAAATTTCTGTCAATGA 106370 |||| |||| |||||| || ||| ||| ||||| || || |||| | ||||| | Sbjct 306272 GTCTATGTCTCATATTGGATCTTCTCGCTTCTTCAACAGGGTAGTAATTACGATCAATAA 306213 Query 106371 CTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATG-AAGTTTTTCA-----TAAT 106424 ||| ||||| ||| ||||||| || | ||||| || || ||||| | ||| Sbjct 306212 CTCTGTTTAAATTACGAGTAACAACTTTGGCAATTTCGTGTAATTTTTTGAAGTTGTAAG 306153 Query 106425 CAAAAGT---GCGAGTCTC------TTCATTGACATACTTTGGAAGGGCGATTGATGCCA 106475 | |||| || ||| |||| ||| || ||| | ||| | || |||| Sbjct 306152 TAGAAGTTTGGCCGTCCTCTGACGTTTCAATGA---ACGCTGGCAAGGCAACGGAAGCCA 306096 Query 106476 AATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGG 106535 | || |||||||| || || ||| | ||| |||||| | |||||| || ||||| | Sbjct 306095 AGTTACAAACAGCAGTTTCGTCCGGAGCTGAGTACTCAACAATTTCACAGCATAAGTTTG 306036 Query 106536 AACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGA 106595 | ||| || ||||| || ||||||||| |||| ||||||| ||||| || || | Sbjct 306035 ATGACTTGATAACACCCAAGTTTTTTTGGTTAGACTTTCTGTTGCAAGCATCTTTATAAA 305976 Query 106596 GCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACACATCGGCGG 106655 || | || || ||||| || || |||| | | ||| | | ||| | || | Sbjct 305975 CCACAAAAGGTGTACCCGTTTCAGTTTGTGCTTCCAAAATGGAATACCATA-ATTTTTG- 305918 Query 106656 CTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACT 106715 | | ||||| || | || || || ||||| || || || |||||||||| Sbjct 305917 -AGCTTTAATGGTCTTACCACGACCTTCTTTTTCGTAGCGGGTATATAGAGCTTCAAACT 305859 Query 106716 CCTCACCCACCGCGTCGGAGAGACCTGGTGC-CTTGTCTGGACAGAAAAGAGACCATTGA 106774 | ||||| |||| ||||| || || ||| |||| |||| | || ||| Sbjct 305858 CGTCACCGTAACAGTCGCTTAGACCGGGAGCGGCTGT-TGGAGAGAACAAAGTCCAAGTC 305800 Query 106775 CCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCT 106834 ||| ||| || || |||||||||||||| || ||||||||||| | | ||| | |||| Sbjct 305799 CCATTCTCTTCGACACGCTTCATGAAAAGATCAGGAATCCACAGAGCAGGAAACAAATCT 305740 Query 106835 CTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCC 106894 || ||| ||||| | ||| ||||| || | |||| || || | |||||| Sbjct 305739 CTTGCACGAATTTCTTCTTTACCGTGGTTCTTTCTGATATCAATAAAATCAAAGATATCA 305680 Query 106895 GCGTGCCATGGCTCAAGATAGACTGCGATAGATCC----CTTTCGACGCCCAGCTTGATT 106950 || |||||||| || || || | || | | || |||| | ||| | || | Sbjct 305679 GCATGCCATGGTTCCAGGTACAGAGCAAAGGCACCAGGTCTTTTG-TTACCACCCTGGTC 305621 Query 106951 TACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACC 107010 ||||| || || || ||||| || |||| ||| ||||| | || | || ||| Sbjct 305620 GACATAACGGGCGGTATTATTAAAAACACGAATCATGGGAATTAACCCGTTAGAAGTACC 305561 Query 107011 ATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACC 107070 ||||| || ||| ||| | | | | | | |||||| || | |||||||| Sbjct 305560 GTTTGTACCAGCAATGTAAGAACCAGTTGAACGAATGTTATGGATATGTAGACCAATACC 305501 Query 107071 CCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGA 107130 ||||| || || || ||||| || | | ||| | || ||||| | ||| || Sbjct 305500 ACCAGCAGTTTTGGAAATCAAAGCACATTCTTTCAAAGTGTCGTAAATACCCTCGATAGA 305441 Query 107131 GTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATT 107190 ||||||||| |||||| | ||| ||| |||||| || ||| |||| ||||||||||| Sbjct 305440 GTCCTCCTTCATGGCGACCAAGAAACAAGAGGACATTTGAGGTTTTGGAGTACCAGCATT 305381 Query 107191 GAAGAGGGTTGGTGTTGCGTGAATGAACATACCTT-GGGACATCTTGTCGTATGTCTCCA 107249 || | ||||| | || ||| | || || || | ||||| || ||||| || | Sbjct 305380 AAACAAAGTTGGAGAGGCATGAGT-AAAGTATTTTAGAGACATTAAGTTATATGTTTCTA 305322 Query 107250 AGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCATAAACATGTATTGGG 107309 ||| || |||||| ||||||||||| | || || | ||||| | || ||| | Sbjct 305321 GAGCAGCTTCGATGTCTCTACCGTGGATGCCCAGTGCGACTCTCATAATTAAGTGTTGTG 305262 Query 107310 G 107310 | Sbjct 305261 G 305261 >seq15 Length=1201643 Score = 242 bits (268), Expect = 4e-59 Identities = 899/1382 (65%), Gaps = 50/1382 (4%) Strand=Plus/Plus Query 105953 GGTTCAAAGCATTCATTATTACCCAAGA-TTTGTGCGGTGGAGGCTGTTGGCATTGGTGC 106011 |||||||| ||||| |||| |||||||| |||| | || ||||| ||||||||||| || Sbjct 234928 GGTTCAAAACATTCGTTAT-ACCCAAGAATTTGAGAAGTCGAGGCAGTTGGCATTGGCGC 234986 Query 106012 CATCA--AAAGACTGTTACGAAGACCCTTTTCCTTGATG-CGTTCCTTGAGAACATCCCA 106068 ||| ||||| ||| | | || | || ||| | || ||| ||| ||||| Sbjct 234987 CATTGTTAAAGA--GTTTCTTAATCCATGTTTGACTATGTCCTTTCTTAAGATT-TCCCA 235043 Query 106069 GTCGTAGTTGAGCT--TGGTTTCACCTTCCCACATATCAAATTGAAGCACCCCTTGGGAC 106126 || | | | | ||| || | |||| |||| |||||||| || | || | || Sbjct 235044 ATCCCACAT-ACCAAATGGCTTAGCGTTCC-ACATGTCAAATTGTAGAATACCCTTAGAG 235101 Query 106127 GTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAG--CCAATTCACAGCTCG 106184 | |||||||| || || || ||| ||||| |||| | ||||||||||| | Sbjct 235102 GCTGGAGAACCTTCGAAAGTGGAATACTTACCTTC--CTTCTGTGCCAATTCACAGGAGG 235159 Query 106185 CCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCAT 106244 | || || | || ||||| |||||||| || || | |||| | ||||| | Sbjct 235160 CTTCAAGAGTAGCATGATAGATGGTTTCGAAAATCTGTTTGTTCAAAGTTTGAGCTTCTT 235219 Query 106245 CTGAATCAAATGCGTAGCGGCA-CAAAATAAATACATCCGCGAGACCTTGAACACCCAAA 106303 | || ||||| | |||| ||| || ||| | ||| || ||||||||||||||||| Sbjct 235220 CCGATTCAAAGG-GTAGACGCAACATCATATAGGTATCGGCCAGACCTTGAACACCCAAG 235278 Query 106304 CCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACGGGATAAAAATTTCTG 106363 |||||||||| || |||||| || |||| || ||| |||||| |||| | Sbjct 235279 GCAATAGGTCTATGCTTCATATTTGAATTTCTGGCTTCAGGAACTGGATAATAATTACGA 235338 Query 106364 TCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAA 106423 || ||||||| ||| | || | ||||| | || | |||||||| | | || || Sbjct 235339 TCGATGACTCTGTTCAAGTTATGGGTAATTACTTTAGCAATTTCATGTAAACTCTCGAAA 235398 Query 106424 TCAAAAGTGCGAGTCT------CTTCA------TTGACATACTTTGGAAGGGCGATTGAT 106471 | | || | ||| | ||||| | |||| | ||| ||||| || || Sbjct 235399 TTATAACTTGCAGTTTTACCATCTTCAGACATCTCGACAAATGCTGGGAGGGCAATAGAG 235458 Query 106472 GCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAG 106531 || | ||| ||||| || || ||||| | ||||| | ||||| |||||| Sbjct 235459 GCTAGATTACAAACGGCGGTTTCATCTGGGGAGGAATACTCGACGATTTCACAACACAAA 235518 Query 106532 TTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTG 106591 ||||| ||||| || ||||| |||| |||||| ||||| | || || | |||||| Sbjct 235519 TTGGATGATTTAATGGTACCCAAGTTCTGTTGGTTTGTCTTTCTATTACATGAGTCCTTG 235578 Query 106592 TAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTG-AGAATTGCCTTCCACA-CAT 106649 || | |||| | || || || || || || |||| |||| | |||||| | ||| | | | Sbjct 235579 TAAACCATGAAAGGTGTACCTGTTTCTGTTTGTG-CTTGTAAAATTGCATACCATAACTT 235637 Query 106650 CGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTT 106709 | | || ||||| || | || || ||| ||||| || || || ||| Sbjct 235638 TTGGGCCTT----AATGGTTTTACCACGACCTTCCCTTTCGTAACGGGTATATAGCTCTT 235693 Query 106710 CAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACC 106769 |||| || |||||| | || | |||||| || ||| | || | || || Sbjct 235694 CAAATTCATCACCCCAGACATCATCTAAACCTGGGGCAGCACTGGGAGAAAATAAAGTCC 235753 Query 106770 ATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGA 106829 | | ||| |||| | ||| || ||||| |||||||| ||||||||||| | | || | Sbjct 235754 AGGGCCCATCCTCTTGAACACGTTTCATAAAAAGGTCAGGAATCCACAGAGCAGGGAACA 235813 Query 106830 GATCTCTA-CACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATG 106888 ||| || ||| || ||||| | ||| ||| | || | || | || || | | Sbjct 235814 AATCCCTTGCACGGATT-TCTTCTTTACCATGGGTTTTTCTAATATCGACAAAGTCGAAG 235872 Query 106889 ATATCCGCGTGCCATGGCTC-AAGATAG-----ACTGCGATAGATCCCTTTCGACGCCCA 106942 ||||| || |||||||| || |||| | | ||| || || ||| || || Sbjct 235873 ATATCTGCATGCCATGGTTCCAAGAAAAGGGCAAAGGCGCCAGGTCTCTTGTTACCTCC- 235931 Query 106943 GCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCT 107002 ||| | ||||| || || || ||| || || || | ||| ||||| | |||| | Sbjct 235932 --TTGGTCCACATAACGAGCAGTATTGTTGAAAACACGGATCATAGGAATCAACCCATTT 235989 Query 107003 GATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATC 107062 || ||| || || || ||| ||| ||| | | | | || || | Sbjct 235990 GAAGTACCGTTGGTACCGGCGATATAAGAACCTGTGGAACGGATGTTGTTAATATGAAGA 236049 Query 107063 CCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCG 107122 |||| ||| || || ||| || || ||||| || | | ||| |||| ||||| Sbjct 236050 CCAACACCACCTGCAGTCTTGGAAATCATAGCACATTCTTTCAAAGTATCATAAATACCT 236109 Query 107123 TTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTA 107182 | || ||||| ||||| |||| || ||||| || ||||| || || ||| ||| Sbjct 236110 TCAATAGAGTCATCCTTCATGGCAATTAGGAAACATGAAGACATTTGGGGATGTGGAGTA 236169 Query 107183 CCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGG-GACATCTTGTCGTA 107241 ||||| ||||| | |||||| | |||||| |||| ||| ||| |||||| | ||| Sbjct 236170 CCAGCGTTGAATAAGGTTGGGGAAGCGTGAGTGAA-ATATCTTAACGACATCAAATTGTA 236228 Query 107242 TGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCATAAACAT 107301 |||| || ||||| ||||| || |||||||| || | ||||||||||||| || Sbjct 236229 GGTCTTCAGCACAGACTCAATATCACTACCGTGGATACCCAGCGCCACACGCATAACCAA 236288 Query 107302 GT 107303 || Sbjct 236289 GT 236290 >seq10 Length=751133 Score = 82.4 bits (90), Expect = 9e-11 Identities = 102/140 (73%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 117274 GCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCT 117333 ||||| || ||| | ||| || |||| | |||| | ||| || |||||| | ||| Sbjct 380495 GCAAAGTCGGTGTGCAAACCTTCGTCTCTGCAAATCAATTCGTTAGAGAAGGTCAAACCT 380436 Query 117334 GGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATA 117393 ||||| | ||| | |||||||||||| |||| | | ||| || ||||||||||||| | Sbjct 380435 GGCATCATACCTCTCTTCTTCAACCAGAAAATGGAGGCGAAGGAACCGGAGAAGAAGACA 380376 Query 117394 CCCTCCACACACGCAAACGC 117413 || || | | | ||||| || Sbjct 380375 CCTTCGATAGAAGCAAAGGC 380356 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589980674629080