Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079145.1_202017-03-
21] 17 sequences; 12,214,669 total letters
Query= NC_015280.1
Length=181044
Score E
Sequences producing significant alignments: (Bits) Value
seq13 107 2e-18
>seq13
Length=869764
Score = 107 bits (118), Expect = 2e-18
Identities = 324/492 (66%), Gaps = 20/492 (4%)
Strand=Plus/Plus
Query 154602 ATCACAGGGTTTGATTCTATATCATTACAACCTAACGCAGGATCACAGGGTGAGTATGCA 154661
|| ||||| || ||| ||| || ||||||||||| |||| |||| ||||| || |
Sbjct 555519 ATTACAGGTTTCGATGGTATTTCTTTACAACCTAATTCAGGTGCACAAGGTGAATACACC 555578
Query 154662 GGACTGTTAGCAATCCAAGCATACCATCAAGGATCAGGAGATGATAAAAGAAATGTATGT 154721
|| || || |||| | | ||| || | || || | | | || ||||||
Sbjct 555579 GGTTTGAGAGTAATCAGATCTTACTTGGAAAGCAAGGGTGAAAGTTACCGTAACGTATGT 555638
Query 154722 TTGATACCAGAGTCAGCACATGGAACTAATCCTGCTAGTGCTGTCATGGCAGGGATGAAA 154781
|| || || | || || ||||| || ||||| ||| ||||| |||||| || |||||
Sbjct 555639 TTAATCCCCGTTTCCGCTCATGGCACAAATCCAGCTTCTGCTGCCATGGCGGGTTTGAAA 555698
Query 154782 GTTGTAGGTGTCAAGTGTGATGATGATGGT-------AACA--TAGACATCAAAGATCTA 154832
||||| |||||| ||| | |||||| | | | ||| | ||||| | |
Sbjct 555699 GTTGTTCCTGTCAACTGTTTACAAGATGGTTCTTTGGATCTGGTTGACTT-AAAGACCAA 555757
Query 154833 GAGAAGAAAGCAATCATGAATACATTTGAACTGTCATGTATTATGATTACATACCCATCT 154892
| |||||| || | || | | | ||| | ||| ||||| || || || |||
Sbjct 555758 GGCTGAAAAGCATTC-TAAAGAACT---AGCTGCC--GTA--ATGATCACTTATCCTTCT 555809
Query 154893 ACACATGGTGTATTTGAAACTAACATTAGACA-GATATGTAAGATCGTTCATGACAATGG 154951
|| ||||| |||||||| | ||| ||| | ||| | ||||| ||| |||
Sbjct 555810 ACTTATGGTTTATTTGAACCAGGCATCCAACATGCTATCGAT-ATCGTGCATTCTTTTGG 555868
Query 154952 TGGTCAGGTATATCTTGATGGAGCAAATCTAAATGCACAGGTAGGACTAGCAAAACCATG 155011
||| || |||||| | ||||| || ||| | || || ||||| || || | |||| |
Sbjct 555869 TGGGCAAGTATATTTGGATGGTGCTAATATGAACGCGCAGGTTGGGTTAACTTCACCAGG 555928
Query 155012 TGAGTATGGTGCAGATGTATGTCATCTAAACTTACATAAAACATTCTGTATTCCACATGG 155071
|| |||||||||||| || || | || || || || ||||| | || || |||||
Sbjct 555929 AGATCTTGGTGCAGATGTCTGCCACTTGAATTTGCACAAGACATTTTCCATCCCTCATGG 555988
Query 155072 AGGTGGAGGTCC 155083
||||| |||||
Sbjct 555989 TGGTGGTGGTCC 556000
Score = 93.3 bits (102), Expect = 5e-14
Identities = 152/219 (69%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 153768 CAAAGGTTTGGTATTCCTATGGGATATGGAGGTCCTCATGCTGCATTCTTTGCAACAACA 153827
||| | |||||| | || ||||| ||||| |||||||||||||| || ||||| |
Sbjct 554655 CAACGATTTGGTGTCCCAATGGGTTATGGTGGTCCTCATGCTGCCTTTTTTGCTGTCATT 554714
Query 153828 GACAAGTATAAGAGAAAGATACCTGGCAGAATTGTAGGTCAGTCAGTAGATAGTGAAGGT 153887
|| |||| || ||||| || || ||||||||||| ||| ||| ||| | |||
Sbjct 554715 GATAAGTTAAATAGAAAAATTCCAGGCAGAATTGTCGGTGTGTCTAAAGACCGCTTAGGG 554774
Query 153888 AATAAAGCATACAGATTAGCACTACAGACTAGAGAGCAGCATATCAGGAGAGACAAAGCA 153947
|| | || | | || || || || || |||||||| || || | | | || || |||
Sbjct 554775 AAAACGGCCTTGCGTTTGGCCCTCCAAACCAGAGAGCAACACATAAAGCGTGATAAGGCA 554834
Query 153948 ACCAGTAACATCTGCACAGCTCAGGCACTGCTGGCTAAT 153986
|| || || || || ||||| || || ||||||||
Sbjct 554835 ACTTCAAATATTTGTACCGCTCAAGCTCTATTGGCTAAT 554873
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 579212676917280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |