Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079145.1_202017-03-
21] 17 sequences; 12,214,669 total letters
Query= NC_015284.1
Length=183806
Score E
Sequences producing significant alignments: (Bits) Value
seq13 113 5e-20
>seq13
Length=869764
Score = 113 bits (124), Expect = 5e-20
Identities = 325/492 (66%), Gaps = 20/492 (4%)
Strand=Plus/Plus
Query 159277 ATCACAGGGTTTGATTCTATATCATTACAACCTAACGCAGGATCACAGGGTGAGTATGCA 159336
|| ||||| || ||| ||| || ||||||||||| |||| |||| ||||| || |
Sbjct 555519 ATTACAGGTTTCGATGGTATTTCTTTACAACCTAATTCAGGTGCACAAGGTGAATACACC 555578
Query 159337 GGACTGTTAGCAATCCAAGCATACCATCAAGGATCAGGAGATGATAAAAGAAATGTATGT 159396
|| || || |||| | | ||| || | || || | | | || ||||||
Sbjct 555579 GGTTTGAGAGTAATCAGATCTTACTTGGAAAGCAAGGGTGAAAGTTACCGTAACGTATGT 555638
Query 159397 TTGATACCAGAGTCAGCACATGGAACTAATCCTGCATCAGCAGTGATGGCAGGGATGAAA 159456
|| || || | || || ||||| || ||||| || || || | ||||| || |||||
Sbjct 555639 TTAATCCCCGTTTCCGCTCATGGCACAAATCCAGCTTCTGCTGCCATGGCGGGTTTGAAA 555698
Query 159457 GTTGTAGGTGTCAAGTGTGATGATGATGGC-------AACA--TAGACATCAAAGATCTA 159507
||||| |||||| ||| | ||||| | | | ||| | ||||| | |
Sbjct 555699 GTTGTTCCTGTCAACTGTTTACAAGATGGTTCTTTGGATCTGGTTGACTT-AAAGACCAA 555757
Query 159508 GAGAAGAAAGCAATCATGAATACATTTGAACTGTCATGTATTATGATTACATATCCATCT 159567
| |||||| || | || | | | ||| | ||| ||||| || ||||| |||
Sbjct 555758 GGCTGAAAAGCATTC-TAAAGAACT---AGCTGCC--GTA--ATGATCACTTATCCTTCT 555809
Query 159568 ACACATGGTGTATTTGAAACAAACATCAGACA-GATATGTAAGATTGTTCATGAGAATGG 159626
|| ||||| |||||||| || |||| ||| | ||| | || || ||| |||
Sbjct 555810 ACTTATGGTTTATTTGAACCAGGCATCCAACATGCTATCGAT-ATCGTGCATTCTTTTGG 555868
Query 159627 TGGTCAGGTATATCTTGATGGTGCAAATCTAAATGCACAGGTAGGTCTAGCAAAACCATG 159686
||| || |||||| | |||||||| ||| | || || ||||| || || | |||| |
Sbjct 555869 TGGGCAAGTATATTTGGATGGTGCTAATATGAACGCGCAGGTTGGGTTAACTTCACCAGG 555928
Query 159687 TGACTATGGTGCAGATGTATGTCATCTAAACTTACATAAGACATTCTGTATTCCACATGG 159746
|| |||||||||||| || || | || || || |||||||| | || || |||||
Sbjct 555929 AGATCTTGGTGCAGATGTCTGCCACTTGAATTTGCACAAGACATTTTCCATCCCTCATGG 555988
Query 159747 AGGTGGAGGTCC 159758
||||| |||||
Sbjct 555989 TGGTGGTGGTCC 556000
Score = 89.7 bits (98), Expect = 6e-13
Identities = 151/219 (69%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 158443 CAAAGGTTTGGTATTCCTATGGGATACGGAGGTCCTCATGCTGCATTCTTTGCAACAACA 158502
||| | |||||| | || ||||| || || |||||||||||||| || ||||| |
Sbjct 554655 CAACGATTTGGTGTCCCAATGGGTTATGGTGGTCCTCATGCTGCCTTTTTTGCTGTCATT 554714
Query 158503 GACAAGTATAAGAGAAAGATACCTGGCAGAATTGTAGGTCAGTCAGTAGATAGCGAAGGT 158562
|| |||| || ||||| || || ||||||||||| ||| ||| ||| || |||
Sbjct 554715 GATAAGTTAAATAGAAAAATTCCAGGCAGAATTGTCGGTGTGTCTAAAGACCGCTTAGGG 554774
Query 158563 AATAAAGCATACAGATTAGCACTACAGACTAGAGAGCAGCATATCAGAAGAGACAAAGCA 158622
|| | || | | || || || || || |||||||| || || | | || || |||
Sbjct 554775 AAAACGGCCTTGCGTTTGGCCCTCCAAACCAGAGAGCAACACATAAAGCGTGATAAGGCA 554834
Query 158623 ACCAGTAACATCTGCACAGCACAAGCACTGCTGGCTAAT 158661
|| || || || || || ||||| || ||||||||
Sbjct 554835 ACTTCAAATATTTGTACCGCTCAAGCTCTATTGGCTAAT 554873
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588051075039120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |