Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079145.1_202017-03- 21] 17 sequences; 12,214,669 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq10 163 3e-35 >seq10 Length=751133 Score = 163 bits (180), Expect = 3e-35 Identities = 385/575 (67%), Gaps = 11/575 (2%) Strand=Plus/Minus Query 37167 AACAATAAACATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAGAA 37226 |||||||| |||||||| || || |||||||| ||||| | |||||||| ||||| Sbjct 380507 AACAATAAGCATGCAAAGTCGGTGTGCAAACCTTCGTCTCTGCAAATCAATTCGTTAGAG 380448 Query 37227 AAGGTTAATCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGATCCA 37286 ||||| || |||||||| | |||||| || || | ||| || || | || || || || Sbjct 380447 AAGGTCAAACCTGGCATCATACCTCTCTTCTTCAACCAGAAAATGGAGGCGAAGGAACCG 380388 Query 37287 GAAAAGAAAATACCTTCAACTGCTGCAAATGCTACAAGACGTGTACCGAAAGTTGAACTA 37346 || ||||| | |||||| | | ||||| || || || | | ||| || | | Sbjct 380387 GAGAAGAAGACACCTTCGATAGAAGCAAAGGCGACTAGTCTTTCACCAAACAAGGCGTCA 380328 Query 37347 TAATCAGAAATCCAtttttttGTCCAATCTGCCTTTAATTTAACACATTCA---ATTGTT 37403 || ||||||| || | ||| || ||||| | | | ||| || || Sbjct 380327 GCGTCTTGAATCCATCTTAGAGCCCACTCGGCCTTC---TCACCGATTTCTGGGATAGTG 380271 Query 37404 TCAATTGCTTTTAAGAGAAAGtttttttCTTCACTATCTGTTATATAAGTATCAATTAGT 37463 | ||| || || || | || | |||| | | || | || || ||||| || | | Sbjct 380270 TGAATGGCATTGAACAAGAATTCACTTTCCTTAGGGTCCTTGATGTAGGTATCGATCAAT 380211 Query 37464 AAACTATACATTTCAGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACACCTA 37523 || || ||||||| |||||||||||||| || || |||||||| |||| | | Sbjct 380210 AAGGAGTAAGTTTCAGAATGAATATTTTCAATCATGATTTGGAAACCATAGAAACTCTTT 380151 Query 37524 GCTTCAGATAATTGAACATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTATCCCA 37583 || || | | |||||| ||| | | || | | | | |||||||||||||| || || Sbjct 380150 GCCTCTGGAATTTGAACTTCGGTGGAGAAGTTTTCAACCAAGTTTTCATTAACAATACCG 380091 Query 37584 TCACTAGCTGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCAT--TTGATA 37641 ||| ||| || || || |||||||| |||||| ||| || | | || || Sbjct 380090 TCAGAAGCGGCGAAAAAGGCAAGAACTCTAGAAATAAAAAATCTCTCGTTTTCGTTCATT 380031 Query 37642 AT-TTTTTCCAATCATTAATATCTTTTGATAAATCAACTTCATCAACGGTCCAAAAACTT 37700 | || ||||| |||| |||||| || || ||||||| ||| ||| ||||||| ||| Sbjct 380030 CTGTTGTTCCAGTCATGAATATCCTTAGACAAATCAATTTCTTCAGCGGTCCAGAAAGAG 379971 Query 37701 GCCAATGCACGTTTATACATCGT-CCAAATATCAT 37734 || ||||| ||||| | | | |||||| |||| Sbjct 379970 GCTTCGGCACGCTTATA-AGCTTGCCAAATTTCAT 379937 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592316674132680