Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079145.1_202017-03- 21] 17 sequences; 12,214,669 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq5 145 4e-30 seq15 105 3e-18 >seq5 Length=577572 Score = 145 bits (160), Expect = 4e-30 Identities = 316/473 (67%), Gaps = 0/473 (0%) Strand=Plus/Minus Query 25890 TTGGACAGAATAAATGCCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGGAA 25949 ||||| |||| ||| |||| |||| | || || || ||| || | ||| |||| Sbjct 305822 TTGGAGAGAACAAAGTCCAAGTCCCATTCTCTTCGACACGCTTCATGAAAAGATCAGGAA 305763 Query 25950 TCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTTTA 26009 |||||| ||| ||| |||||||| || | ||||||||||| ||||| |||||| | | Sbjct 305762 TCCACAGAGCAGGAAACAAATCTCTTGCACGAATTTCTTCTTTACCGTGGTTCTTTCTGA 305703 Query 26010 GATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACCTT 26069 ||| | |||||||| ||||| | ||||||||||| | || | |||||| ||| Sbjct 305702 TATCAATAAAATCAAAGATATCAGCATGCCATGGTTCCAGGTACAGAGCAAAGGCACCAG 305643 Query 26070 TTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACATTG 26129 |||||| ||||| || || || || | || || | ||| ||||| | ||| | Sbjct 305642 GTCTTTTGTTACCACCCTGGTCGACATAACGGGCGGTATTATTAAAAACACGAATCATGG 305583 Query 26130 GAACTAATCCAGTTGAAAATCCGTTTGTGCTATGAATCTTGGATCCTGTCGATCTAATAT 26189 ||| ||| || | ||| |||||||| | | ||| | || || || || | ||| | Sbjct 305582 GAATTAACCCGTTAGAAGTACCGTTTGTACCAGCAATGTAAGAACCAGTTGAACGAATGT 305523 Query 26190 CGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAATAGCTGCACAATCTGAAACTG 26249 || ||| | ||| || |||||||| ||| ||||| ||||| ||| | | Sbjct 305522 TATGGATATGTAGACCAATACCACCAGCAGTTTTGGAAATCAAAGCACATTCTTTCAAAG 305463 Query 26250 TATCGAAAATTCCTTTTATGCTATCACCTTTCATTCCTAATAAAAAACAAGAAGATAATT 26309 | ||| |||| || | || || | ||||| | | || |||||||| || | || Sbjct 305462 TGTCGTAAATACCCTCGATAGAGTCCTCCTTCATGGCGACCAAGAAACAAGAGGACATTT 305403 Query 26310 GCGAATGAGTTGTTCCTGAATTAAATAATGTCGGTGTAGCATGAGTATAATAT 26362 | | | | || || | |||||| || || || | ||||||||| | ||| Sbjct 305402 GAGGTTTTGGAGTACCAGCATTAAACAAAGTTGGAGAGGCATGAGTAAAGTAT 305350 >seq15 Length=1201643 Score = 105 bits (116), Expect = 3e-18 Identities = 282/431 (65%), Gaps = 0/431 (0%) Strand=Plus/Plus Query 25933 CATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTT 25992 |||||| | || |||||||||| ||| || ||||| || || | ||||||||||| Sbjct 235779 CATAAAAAGGTCAGGAATCCACAGAGCAGGGAACAAATCCCTTGCACGGATTTCTTCTTT 235838 Query 25993 TCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATA 26052 || || | ||| | | ||| | || || || ||||||| ||||||||||| || | Sbjct 235839 ACCATGGGTTTTTCTAATATCGACAAAGTCGAAGATATCTGCATGCCATGGTTCCAAGAA 235898 Query 26053 GATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATT 26112 | ||||| || ||| || || ||||| || || || | ||||| | || Sbjct 235899 AAGGGCAAAGGCGCCAGGTCTCTTGTTACCTCCTTGGTCCACATAACGAGCAGTATTGTT 235958 Query 26113 GAAAACTTTCAACATTGGAACTAATCCAGTTGAAAATCCGTTTGTGCTATGAATCTTGGA 26172 |||||| | ||| |||| || ||| ||||| ||||| || | || | || Sbjct 235959 GAAAACACGGATCATAGGAATCAACCCATTTGAAGTACCGTTGGTACCGGCGATATAAGA 236018 Query 26173 TCCTGTCGATCTAATATCGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAATAGC 26232 ||||| || | || | || | ||||| ||| | ||||| || || ||||| Sbjct 236019 ACCTGTGGAACGGATGTTGTTAATATGAAGACCAACACCACCTGCAGTCTTGGAAATCAT 236078 Query 26233 TGCACAATCTGAAACTGTATCGAAAATTCCTTTTATGCTATCACCTTTCATTCCTAATAA 26292 ||||| ||| | ||||| |||| |||| || ||| | ||||| | | || Sbjct 236079 AGCACATTCTTTCAAAGTATCATAAATACCTTCAATAGAGTCATCCTTCATGGCAATTAG 236138 Query 26293 AAAACAAGAAGATAATTGCGAATGAGTTGTTCCTGAATTAAATAATGTCGGTGTAGCATG 26352 ||||| ||||| | ||| | ||| | || || | || ||||| || || | ||| || Sbjct 236139 GAAACATGAAGACATTTGGGGATGTGGAGTACCAGCGTTGAATAAGGTTGGGGAAGCGTG 236198 Query 26353 AGTATAATATC 26363 ||| |||||| Sbjct 236199 AGTGAAATATC 236209 Score = 95.1 bits (104), Expect = 6e-15 Identities = 100/132 (76%), Gaps = 0/132 (0%) Strand=Plus/Plus Query 25048 GTTTGAAGTGAATGGTTCAAAACATTCATTATTTCCTAAGATTTGAGAAGTAGATGCTGT 25107 ||||||||| | ||||||||||||||| |||| || | ||||||||||| || || || Sbjct 234915 GTTTGAAGTCACTGGTTCAAAACATTCGTTATACCCAAGAATTTGAGAAGTCGAGGCAGT 234974 Query 25108 TGGCATTAATGCTATTAATAGCGAATTTCTCAAACCATATTTAACAATCTCTTGTTTTAA 25167 ||||||| || ||| || || ||||| || |||| ||| || || || | | |||| Sbjct 234975 TGGCATTGGCGCCATTGTTAAAGAGTTTCTTAATCCATGTTTGACTATGTCCTTTCTTAA 235034 Query 25168 TTTATCCCAATC 25179 | |||||||| Sbjct 235035 GATTTCCCAATC 235046 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253039947573275