Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079145.1_202017-03- 21] 17 sequences; 12,214,669 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq13 123 3e-23 >seq13 Length=869764 Score = 123 bits (136), Expect = 3e-23 Identities = 321/485 (66%), Gaps = 6/485 (1%) Strand=Plus/Minus Query 138204 GGACCTCCACCTCCATGTGGAATACAGAATGTCTTATGTAAATTTAGATGACATACATCT 138263 ||||| ||||| ||||| || || | |||||||| || ||||| | || || |||||| Sbjct 556000 GGACCACCACCACCATGAGGGATGGAAAATGTCTTGTGCAAATTCAAGTGGCAGACATCT 555941 Query 138264 GCACCATAGTCACATGGTTTTGCTAGACCTACCTGTGCATTTAGATTTGCACCATCGAGA 138323 |||||| || | |||| | || || ||||| || || | ||| |||||||| | | Sbjct 555940 GCACCAAGATCTCCTGGTGAAGTTAACCCAACCTGCGCGTTCATATTAGCACCATCCAAA 555881 Query 138324 TATACCTGACCACCATTGTCATGAACGATCTTACATATC-TGTCTGATGTTTGTTTCAAA 138382 ||||| || |||||| ||| ||||| | ||| | ||| |||| || |||||| Sbjct 555880 TATACTTGCCCACCAAAAGAATGCACGAT-ATCGATAGCATGTTGGATGCCTGGTTCAAA 555822 Query 138383 TACACCATGAGTCGATGGATATGTAATCATAATACATGAG--AGTTCAAATGTATTCATG 138440 || ||||| ||| || ||||| || ||||| ||| || ||||| | || | | Sbjct 555821 TAAACCATAAGTAGAAGGATAAGTGATCAT--TACGGCAGCTAGTTCTTTAGAATGCTTT 555764 Query 138441 ATTGCTTTCTTCTCTAGATCTTTGATGTCTATGTTGCCATCATCATCACACTTGACACCT 138500 || || ||| || || | || | ||||| | ||| |||||| Sbjct 555763 TCAGCCTTGGTCTTTAAGTCAACCAGATCCAAAGAACCATCTTGTAAACAGTTGACAGGA 555704 Query 138501 ACAACTTTCATTCCTGCCATGACTGCACTAGCAGGATTAGTTCCATGTGCTGACTCTGGT 138560 |||||||||| || |||||| | ||| ||| ||||| || ||||| || || | || Sbjct 555703 ACAACTTTCAAACCCGCCATGGCAGCAGAAGCTGGATTTGTGCCATGAGCGGAAACGGGG 555644 Query 138561 ATCAGACATACATTTCTTTTATCATCTCCTGATCCTTGATGATATGCTTGGATTGCTAAC 138620 || | |||||| || | | | || || | || || | | |||| || | Sbjct 555643 ATTAAACATACGTTACGGTAACTTTCACCCTTGCTTTCCAAGTAAGATCTGATTACTCTC 555584 Query 138621 AGTCCTGCATACTCACCCTGTGATCCTGCGTTAGGTTGTAATGATATAGAATCAAAACCT 138680 | || | || ||||| |||| |||| ||||||||||| || ||| ||| |||||| Sbjct 555583 AAACCGGTGTATTCACCTTGTGCACCTGAATTAGGTTGTAAAGAAATACCATCGAAACCT 555524 Query 138681 GTGAT 138685 || || Sbjct 555523 GTAAT 555519 Score = 84.2 bits (92), Expect = 3e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 139311 AGTGCTTGTGCTGTGCAGATGTTACTGGTTGCTTTGTCTCTTCTAATATGCTGCTCTCTA 139370 || ||||| || || || || || ||||| || || | | || || |||||||| Sbjct 554863 AGAGCTTGAGCGGTACAAATATTTGAAGTTGCCTTATCACGCTTTATGTGTTGCTCTCTG 554804 Query 139371 GTTTGTAGTGCTAATCTGTATGCAGGATTGCCTTCGCTGTCCACTGACTGACCTACAATT 139430 ||||| || || || | | || | || ||| || ||| ||| ||| |||||| Sbjct 554803 GTTTGGAGGGCCAAACGCAAGGCCGTTTTCCCTAAGCGGTCTTTAGACACACCGACAATT 554744 Query 139431 CTGCCAGGTATCTTTCTCTTATACTTGTCTGTTGTTGCAAAGAATGCAGCATGAGGACCT 139490 ||||| || || ||||| || |||| || | ||||| || |||||||||||||| Sbjct 554743 CTGCCTGGAATTTTTCTATTTAACTTATCAATGACAGCAAAAAAGGCAGCATGAGGACCA 554684 Query 139491 CCGTATCCCATAGGAATACCAAACCTTTG 139519 || || ||||| || | |||||| | ||| Sbjct 554683 CCATAACCCATTGGGACACCAAATCGTTG 554655 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578998276962840