Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079145.1_202017-03- 21] 17 sequences; 12,214,669 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq15 152 2e-31 seq5 147 6e-30 seq13 118 3e-21 seq11 107 6e-18 >seq15 Length=1201643 Score = 152 bits (168), Expect = 2e-31 Identities = 222/311 (71%), Gaps = 2/311 (1%) Strand=Plus/Plus Query 156060 TTGCCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAGGAATAATA 156119 || || || || || ||||| |||||||| || ||||| |||| | ||||||||| | Sbjct 235924 TTACCTCCTTGGTCCACATAACGAGCAGTATTGTTGAAAACACGGATCATAGGAATCAAC 235983 Query 156120 CCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGCGAACATTATGAATA 156179 ||||| ||||| || ||||| ||| |||| ||||| | || || | || | |||| Sbjct 235984 CCATTTGAAGTACCGTTGGTACCGGCGATATAAGAACCTGTGGAACGGATGTTGTTAATA 236043 Query 156180 TGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCTTTACAGTATTGAAA 156239 || || |||| |||||||| || ||||| ||| ||||| || | ||||| || Sbjct 236044 TGAAGACCAACACCACCTGCAGTCTTGGAAATCATAGCACATTCTTTCAAAGTATCATAA 236103 Query 156240 ATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGAACTTAATTGAGGTCGT 156299 |||||||||||||| ||||| | ||| | | ||| | || ||| | ||| || || Sbjct 236104 ATACCTTCAATAGAGTCATCCTTCATGGCAATTAGGAAACATGAAGACATTTGGGGATGT 236163 Query 156300 GGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATA-CTTATTAGACATATA 156358 || || ||||||||||||| || || | || ||| | ||||| |||| ||||| | Sbjct 236164 GGAGTACCAGCGTTGAATAAGGTTGGGGAAGCGTGAGTGAAATATCTTA-ACGACATCAA 236222 Query 156359 ATCGTATGTCT 156369 || ||| |||| Sbjct 236223 ATTGTAGGTCT 236233 Score = 84.2 bits (92), Expect = 6e-11 Identities = 106/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 233272 AGCACCGTGAGCAATCATACAATCACGTTCCATTTCACCAATACGCAGACCACCATCATT 233331 |||||| | ||||| | |||||| | |||||| ||||| | | |||||||||||| | Sbjct 817228 AGCACCATAGGCAATTACACAATCTCTTTCCATCTCACCCAACCTCAGACCACCATCCCT 817287 Query 233332 TGACCTACCCTGGACTGTTTGACGAGTTAAAACAGTTCTTGGACCCTGAGCACGATAATT 233391 || ||||| | | |||||| || || |||| |||||||| |||| | || Sbjct 817288 GGATCTACCTTCAGTAGGTTGACGTGTCAAGACAGCCCTTGGACCACGAGCTCTTGCATG 817347 Query 233392 AATTTTATCTTTAACCATATGCTTCA 233417 || |||||| |||||||||||||| Sbjct 817348 CATCTTATCTAAAACCATATGCTTCA 817373 >seq5 Length=577572 Score = 147 bits (162), Expect = 6e-30 Identities = 241/347 (69%), Gaps = 3/347 (1%) Strand=Plus/Minus Query 156012 ATATCAGGATGGTGTGGCTCCAGATACATAGCAAAACTACCATTCCTCTTG---CCACCC 156068 ||||||| ||| ||| ||||| |||| |||||| |||| || ||| |||||| Sbjct 305685 ATATCAGCATGCCATGGTTCCAGGTACAGAGCAAAGGCACCAGGTCTTTTGTTACCACCC 305626 Query 156069 TGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAGGAATAATACCATTGGAA 156128 || || ||||| || || || ||||| || |||| | ||| ||||| | || || ||| Sbjct 305625 TGGTCGACATAACGGGCGGTATTATTAAAAACACGAATCATGGGAATTAACCCGTTAGAA 305566 Query 156129 GTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGCGAACATTATGAATATGTAGTCCA 156188 || || || || || ||| | ||||||| ||| |||| ||||| |||||||| ||| Sbjct 305565 GTACCGTTTGTACCAGCAATGTAAGAACCAGTTGAACGAATGTTATGGATATGTAGACCA 305506 Query 156189 ATACCACCTGACCATTTAGAAATTTGAGCGCATTCCTTTACAGTATTGAAAATACCTTCA 156248 |||||||| | ||| ||||| ||| ||||| || | ||| | | ||||||| || Sbjct 305505 ATACCACCAGCAGTTTTGGAAATCAAAGCACATTCTTTCAAAGTGTCGTAAATACCCTCG 305446 Query 156249 ATAGAATCATCTTCCATTGATAGTAGATAGCACGAACTTAATTGAGGTCGTGGTGTTCCA 156308 ||||| || || | ||| | | | | || || | ||||||| ||| || ||| Sbjct 305445 ATAGAGTCCTCCTTCATGGCGACCAAGAAACAAGAGGACATTTGAGGTTTTGGAGTACCA 305386 Query 156309 GCGTTGAATAGTGTAGGTGTTGCATGAATAAAATACTTATTAGACAT 156355 || || || | || || | |||||| |||| || || |||||| Sbjct 305385 GCATTAAACAAAGTTGGAGAGGCATGAGTAAAGTATTTTAGAGACAT 305339 >seq13 Length=869764 Score = 118 bits (130), Expect = 3e-21 Identities = 210/306 (69%), Gaps = 3/306 (1%) Strand=Plus/Plus Query 288849 CCTATCAAACCTACCAGAACGAGTTAATGCTGGGTCTAATATATCGGCTCTGTTTGTTGC 288908 ||| ||||| ||||||| | ||||||| || | ||||||| ||| || || | Sbjct 361867 CCTGTCAAATCTACCAGGCCTTAGTAATGCTTTATCAAGAATATCGGGTCTATTGGTACC 361926 Query 288909 TGCCAATACAACAATAGATTCGGTTTGCTTAAATCCATCCATACTTGTTAAAATTTGATT 288968 || || ||||||| | || | | | |||| |||||||| | ||| |||||||| Sbjct 361927 AGCTAAGACAACAACATGGTCAGCTGGAGTAAAGCCATCCATTTCTACTAACATTTGATT 361986 Query 288969 AAGTGTTTGTTCCCTTTCATCATTTGAACCTCTTGAATCACCCGAATCGCTCCttttttt 289028 || || | || || ||||| || | |||| ||| |||| | ||| ||| Sbjct 361987 CAGCGTGTTCTCTCTCTCATCGTTAGCACCTGAAAAATTACCCTTTTG---CCTAGCTTT 362043 Query 289029 ACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAATTGC 289088 || | ||| |||||||||||||| || | | | || | ||||| ||| ||| | Sbjct 362044 CCCTATAGCGTCAATTTCGTCAATAAACACAATCGAAGGTGCATTTTCTCTTGCAGTCTT 362103 Query 289089 AAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGAAGC 289148 |||||| |||||||| | | || |||| ||||||| |||||||||||||||| ||| | Sbjct 362104 AAATAAATCTCTTACTCTTGCAGCACCAACACCAACAAACATTTCTACAAATTCTGAACC 362163 Query 289149 GGATAC 289154 || || Sbjct 362164 AGAAAC 362169 >seq11 Length=805821 Score = 107 bits (118), Expect = 6e-18 Identities = 109/142 (77%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 302539 TTTCTTACGGTCATATCATAACCAATCATAATGTCTTCCATACTCTTGATTAAACGACGC 302598 |||||| ||| |||| ||| | ||| || ||||| | | || | ||||||||| Sbjct 210519 TTTCTTGTGGTGTTATCGTAATGGACCATGATATCTTCTAGAGCTTTCACTAAACGACGT 210578 Query 302599 TGAATATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCC 302658 ||||||||||| ||| || |||||| ||||| ||||| || ||||| ||||||||||| Sbjct 210579 TGAATATAACCTGTTTCAGCTGTTTTAACAGCGGTATCGATAAGACCTTCACGACCACCC 210638 Query 302659 ATAGCATGGAAGAATAGCTCTT 302680 || || |||||||| | ||||| Sbjct 210639 ATTGCGTGGAAGAAAAACTCTT 210660 Score = 100 bits (110), Expect = 8e-16 Identities = 134/186 (72%), Gaps = 3/186 (2%) Strand=Plus/Plus Query 301767 TAAATAAATAGTACAGGATGGATTCTTTGTGTTTTCCGATAGAGACAGAATTTCTTCAAT 301826 ||| |||| ||| | || ||| | || |||||| | | | || |||||||| | Sbjct 209732 TAAGTAAACAGTCAAAGAAGGAGTTTTCATGTTTTTGGCCACATTCAAAATTTCTTTTAA 209791 Query 301827 ACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAGCAAAGTGGAAAGTATT 301886 ||||||||||||| || || || |||||| |||||||||||||| ||||| ||||| Sbjct 209792 ACGGGGAACACCAGAAGTAACTTT---CTTGGAAGCAACACCAGCAAAATGGAAGGTATT 209848 Query 301887 CAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAATCATACCAACCATTTC 301946 || || | ||| || | || |||||||| ||| || || | | |||||||||||| Sbjct 209849 TAGTGTCATTTGTGTGGCCGGTTCACCAATGGATTGGGCTGCTAGAACACCAACCATTTC 209908 Query 301947 TCCTGG 301952 || || Sbjct 209909 ACCAGG 209914 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471817279419729