Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079145.1_202017-03-
21] 17 sequences; 12,214,669 total letters
Query= NC_022646.1
Length=101818
Score E
Sequences producing significant alignments: (Bits) Value
seq14 116 2e-21
>seq14
Length=872155
Score = 116 bits (128), Expect = 2e-21
Identities = 168/236 (71%), Gaps = 1/236 (0%)
Strand=Plus/Plus
Query 34743 AATCATTT-CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTA 34801
||||| || || ||||||||||| | ||||||||| | || ||||| ||||||||
Sbjct 56649 AATCAATTACCACCCCTCAACCTTAAGACCAGGTGGAGAGTAGATTCCTTTTGAATGTTG 56708
Query 34802 TAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGG 34861
||||| |||| | | |||| |||||||| || ||||| || |||| || || |||
Sbjct 56709 TAGTCGGATAATGTTCTACCATCTTCCAGTTGTTTACCGGCAAAAATCAATCTCTGTTGG 56768
Query 34862 TCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTG 34921
||| | || | || ||||| || | |||||| |||||| | || | ||
Sbjct 56769 TCTGGAGGAATACCTTCCTTATCTTGAATTTTTGACTTGACGTTGTCAATAGTGTCGGAA 56828
Query 34922 GCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
| ||||| || | |||||| ||||| || || || ||||| || |||||||||||
Sbjct 56829 GATTCGACCTCGAGGGTTATAGTCTTACCAGTCAGCGTCTTAACGAAGATCTGCAT 56884
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810
|| || ||||| |||| ||||| ||||| || |||||| ||||| || || || |||
Sbjct 57114 CCACCTCTCAATCTCAAGACCAAGTGAAGAGTAGACTCCTTTTGAATATTGTAATCGGAT 57173
Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870
| | | |||| |||||||| || ||||| || |||| || || |||||| | ||
Sbjct 57174 AACGTTCTGCCATCTTCCAGTTGTTTACCGGCAAAAATCAATCTCTGTTGGTCTGGAGGA 57233
Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930
| || ||||| || | |||||| |||||| | |||| || | |||||
Sbjct 57234 ATACCTTCCTTATCTTGAATTTTTGACTTGACGTTGTCGATCGTGTCGGAAGATTCGACC 57293
Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|| | || || ||||| || || || ||||| ||||||||||||||
Sbjct 57294 TCCAGAGTAATAGTCTTACCAGTCAGCGTCTTGACAAAGATCTGCAT 57340
Score = 91.5 bits (100), Expect = 1e-13
Identities = 158/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810
|| || ||||| ||||| || | || | ||| || |||||||||||||| || ||
Sbjct 57342 CCACCTCTCAATCTCAGCACTAAATGCAAGGTAGATTCTTTCTGAATGTTATAATCAGAC 57401
Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870
|| | | |||| ||||||||||| ||||| || |||| | || |||||| | ||
Sbjct 57402 AGTGTTCTACCATCTTCCAGTTGCTTACCGGCAAAAATCAACCTCTGTTGGTCTGGAGGA 57461
Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930
| || || ||||| | |||||| |||||| | || | ||| | |||||
Sbjct 57462 ATACCTTCTTTGTCCTGAATTTTTGACTTGACGTTATCAATGGTATCAGAAGATTCGACT 57521
Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATGAT 34980
|| | |||||||| || || || | ||||| ||||| || ||||| ||
Sbjct 57522 TCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACAAAAATTTGCATAAT 57571
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 325692732520523
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |