Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079145.1_202017-03-
21] 17 sequences; 12,214,669 total letters
Query= NC_024697.1
Length=370920
Score E
Sequences producing significant alignments: (Bits) Value
seq15 167 6e-36
seq5 156 1e-32
seq11 123 6e-23
seq10 102 2e-16
>seq15
Length=1201643
Score = 167 bits (184), Expect = 6e-36
Identities = 405/609 (67%), Gaps = 11/609 (2%)
Strand=Plus/Minus
Query 110304 TATTTTGGTTTCAAAACTCTTGAACGTGCTTATTTACTTCGTGTCAATGGCGAGATCATT 110363
|||||||| ||||| ||| | || ||| | ||||| || | | || || || | |
Sbjct 236363 TATTTTGGGTTCAAGACTTTGGAGCGTTCGTATTTGCTAAGACTGAACGGTGAAGTGGCT 236304
Query 110364 GAACGTCCTCAACACATGTTTCTTCGTGTTGCGATTGGTATTCATGGACATGATATTAAA 110423
||||| || || ||| || || | ||||| ||| | ||||| || || ||||||| |
Sbjct 236303 GAACGGCCACAGCACTTGGTTATGCGTGTGGCGCTGGGTATCCACGGTAGTGATATTGAG 236244
Query 110424 GCTGTTATTGAATGTTATGATGT-ATTAAGTAAAAAGAAAGCTATTCATGCTACTCCTAC 110482
|||| | | || || | || || || | | | | ||| ||| | || ||
Sbjct 236243 TCTGTGCTGAAGACCTACAATTTGATGTCGTTAAGATATTTC-ACTCACGCTTCCCCAAC 236185
Query 110483 CCTATTTAACGCAGGAACTAATGGAGGACAATTGGCTTCTTGCTTTCTTCTAGGAATTAA 110542
| |||| ||||| || ||| ||| || |||| || || || | | || ||
Sbjct 236184 CTTATTCAACGCTGGTACTCCACATCCCCAAATGTCTTCATGTTTCCTAATTGCCATGAA 236125
Query 110543 CGATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAACTGCTCTTATTTCTAAAAA 110602
||||| ||||||||||||||||||||| || | |||||| |||| | ||||| || |
Sbjct 236124 GGATGACTCTATTGAAGGTATTTATGATACTTTGAAAGAATGTGCTATGATTTCCAAGAC 236065
Query 110603 CTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAGGAGCAAATATCGCAAC 110662
| || || ||||| |||| || | | || || || | ||| | |||||||
Sbjct 236064 TGCAGGTGGTGTTGGTCTTCATATTAACAACATCCGTTCCACAGGTTCTTATATCGCCGG 236005
Query 110663 AGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACACTGCAAA 110722
| || ||| |||||| ||| | |||| ||| | | || |||||| | |||||
Sbjct 236004 TACCAACGGTACTTCAAATGGGTTGATTCCTATGATCCGTGTTTTCAACAATACTGCTCG 235945
Query 110723 ATATGTGAATCAAGGTGGT---AAGAGAAATGGCTCATTTGCTATCTATCTCGAACCTTG 110779
|||||| | ||||| ||| |||||| |||| | ||||| | | | ||||| ||
Sbjct 235944 TTATGTGGACCAAGGAGGTAACAAGAGACCTGGCGCCTTTGCCCTTTTCTTGGAACCATG 235885
Query 110780 GCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAGAACAAA- 110838
|||| ||||||| || || || | || || | |||| || || | ||||| |||
Sbjct 235884 GCATGCAGATATCTTCGACTTTGTCGATATTAGAAAAACCCATGG---TAAAGAAGAAAT 235828
Query 110839 --GAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAAACGTGTTCA 110896
| ||| | ||||| || ||| |||||||| | || | || ||||||||||||||
Sbjct 235827 CCGTGCAAGGGATTTGTTCCCTGCTCTGTGGATTCCTGACCTTTTTATGAAACGTGTTCA 235768
Query 110897 AGAAAATGG 110905
||| ||||
Sbjct 235767 AGAGGATGG 235759
>seq5
Length=577572
Score = 156 bits (172), Expect = 1e-32
Identities = 560/865 (65%), Gaps = 18/865 (2%)
Strand=Plus/Plus
Query 110304 TATTTTGGTTTCAAAACTCTTGAACGTGCTTATTTACTTCGTGTCAATGGCGAGATCATT 110363
|||||||||||||||||| | |||||| |||||||||| | |||| ||| | |
Sbjct 305195 TATTTTGGTTTCAAAACTTTGGAACGTTCTTATTTACTAAGAATCAACGGCCAAGTGGCC 305254
Query 110364 GAACGTCCTCAACACATGTTTCTTCGTGTTGCGATTGGTATTCATGGACATGATATTAAA 110423
|||||||| |||||| | || | | || || | || || || || || || ||
Sbjct 305255 GAACGTCCACAACACTTAATTATGAGAGTCGCACTGGGCATCCACGGTAGAGACATCGAA 305314
Query 110424 GCTGTTATTGAATGTTATGATGTATTAAGTAAAAAGAAAGCTATTCATGCTACTCCTACC 110483
|||| | | ||| ||| | || | | ||| | || |||||| |||| ||
Sbjct 305315 GCTGCTCTAGAAACATATAACTTAATGTCTCTAAAATACTTTACTCATGCCTCTCCAACT 305374
Query 110484 CTATTTAACGCAGGAACTAATGGAGGACAATTGGCTTCTTGCTTTCTT-CTAGGAATTAA 110542
| ||||| || || ||| | ||| || | ||||| |||||| | | || ||
Sbjct 305375 TTGTTTAATGCTGGTACTCCAAAACCTCAAATGTCCTCTTG-TTTCTTGGTCGCCATGAA 305433
Query 110543 CGATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAACTGCTCTTATTTCTAAAAA 110602
|| || ||||| || |||||||| || || | |||||| |||| | ||||| ||||
Sbjct 305434 GGAGGACTCTATCGAGGGTATTTACGACACTTTGAAAGAATGTGCTTTGATTTCCAAAAC 305493
Query 110603 CTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAGGAGCAAATATCGCAAC 110662
|||| || |||||| | || | ||| | ||||| |||| || | | || ||
Sbjct 305494 TGCTGGTGGTATTGGTCTACATATCCATAACATTCGTTCAACTGGTTCTTACATTGCTGG 305553
Query 110663 AGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACACTGCAAA 110722
| || ||| |||| | || | |||| ||| | | || || || | || ||
Sbjct 305554 TACAAACGGTACTTCTAACGGGTTAATTCCCATGATTCGTGTTTTTAATAATACCGCCCG 305613
Query 110723 ATATGTGAATCAAGGTGGT---AAGAGAAATGGCTCATTTGCTATCTATCTCGAACCTTG 110779
||||| | || |||||| || ||| ||| | |||||| | || || ||||| ||
Sbjct 305614 TTATGTCGACCAGGGTGGTAACAAAAGACCTGGTGCCTTTGCTCTGTACCTGGAACCATG 305673
Query 110780 GCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAGAACAAA- 110838
|||| | ||||| ||||| || | || | | || || || || | ||||| |||
Sbjct 305674 GCATGCTGATATCTTTGATTTTATTGATATCAGAAAGAACCACGG---TAAAGAAGAAAT 305730
Query 110839 --GAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAAACGTGTTCA 110896
| ||| | ||||| ||| ||| |||||||| | ||| | |||||||| ||||| |
Sbjct 305731 TCGTGCAAGAGATTTGTTTCCTGCTCTGTGGATTCCTGATCTTTTCATGAAGCGTGTCGA 305790
Query 110897 AGAAAATGGCATGTGGTCTCTTATGTGTCC-TCATCGTTCTCCTGGTCTATCTGA-TGTA 110954
||| ||||| | ||| || | | | ||| || | |||| |||||| || |||
Sbjct 305791 AGAGAATGGGACTTGGACTTTGTTCTCTCCAACAGC-CGCTCCCGGTCTAAGCGACTGT- 305848
Query 110955 TATGGAAAAGAGTTTGAAGACCTTTACGAAAAATATGAAAAAGAAGGCAAGTTTCGCAAA 111014
|| || | |||||||||| || || || ||||||||||| | | ||
Sbjct 305849 TACGGTGACGAGTTTGAAGCTCTATATACCCGCTACGAAAAAGAAGG---TCGTGGTAAG 305905
Query 111015 CAAATTCCAGCTCAAGAACTTTGGTTCAAAATCCTTGAATCACAAGTTGAAACTGGAACT 111074
||| ||||||| || | |||| || | ||| ||||| |||||| || ||
Sbjct 305906 ACCATTAAAGCTCAAAAATTATGGTATTCCATTTTGGAAGCACAAACTGAAACGGGTACA 305965
Query 111075 CCTTATATTTTGTATAAAGATCATATTAATCGCAAATCTAATCAAATGAATTTAGGAACA 111134
|||| | | | ||||||||| | || | || ||||| |||| || || ||
Sbjct 305966 CCTTTTGTGGTTTATAAAGATGCTTGCAACAGAAAGTCTAACCAAAAAAACTTGGGTGTT 306025
Query 111135 ATTAAGTCTAGTAATTTGTGCTGTG 111159
|| ||||| || || |||||||
Sbjct 306026 ATCAAGTCATCAAACTTATGCTGTG 306050
>seq11
Length=805821
Score = 123 bits (136), Expect = 6e-23
Identities = 155/210 (74%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 305318 GACAATGATTGGGTTCTGTTCAATAGGCAACCATCACTGCATAAAATGTCTATGATGGCT 305377
|| |||||| ||||||||||| | ||||| ||| |||||||||||||||||||||||
Sbjct 211780 GATAATGATCCAGTTCTGTTCAACCGTCAACCCTCATTGCATAAAATGTCTATGATGGCT 211721
Query 305378 CATAAAGTCAAAGTATTATCTGGATT-GACATTTCGATTAAATGTAAGTGCTTGTACGCC 305436
|| | ||| ||||| | || | ||| |||||| |||| ||| | || | | ||
Sbjct 211720 CACAGAGTGAAAGT-TATTCCGTATTCCACATTTAGATTGAATTTGTCTGTTACATCTCC 211662
Query 305437 TTATAATGCGGATTTTGATGGAGATGAAATGAATATGCATGTACCTCAATCAAAGGTTAC 305496
|| ||||| ||||| || || || ||||||||| | || |||||||| || ||| ||
Sbjct 211661 ATACAATGCCGATTTCGACGGTGACGAAATGAATCTTCACGTACCTCAGTCCGAGGAAAC 211602
Query 305497 AATGACTGAATTATCAGAAATATGTTCTGT 305526
|| | | ||| | || || ||||| ||||
Sbjct 211601 AAGGGCAGAACTGTCCCAATTATGTGCTGT 211572
Score = 95.1 bits (104), Expect = 3e-14
Identities = 124/167 (74%), Gaps = 6/167 (4%)
Strand=Plus/Minus
Query 304886 TTACAATATCATATTGCAACATTAATGGATAATGAAATTGCTGG--AATTATGCAGGCAT 304943
||||||| |||| |||| || | ||||||||||| |||||||| || | ||||| |
Sbjct 212206 TTACAATTTCATGTTGCCACTTATATGGATAATGATATTGCTGGCCAACCA--CAGGC-T 212150
Query 304944 CT-CAAAGATCTGGCAGACCTTTAAAGGGTATTAGGCAACGCATTAAAGGTAAAGAGGGT 305002
|| |||| || || | || |||| |||| | || | || ||||||||||||
Sbjct 212149 CTACAAAAGTCCGGTCGTCCCGTAAAATCTATTCGTGCTCGTTTGAAGGGTAAAGAGGGT 212090
Query 305003 CGTATTCGAGGTAATCTAATGGGAAAACGTGTTGATTTTAGTGCAAG 305049
|||||| | |||||| ||||||| || |||||||||||| |||||
Sbjct 212089 CGTATTAGGGGTAATTTAATGGGTAAGCGTGTTGATTTTTCAGCAAG 212043
>seq10
Length=751133
Score = 102 bits (112), Expect = 2e-16
Identities = 343/528 (65%), Gaps = 17/528 (3%)
Strand=Plus/Plus
Query 131489 TTCTGGACTGTTGAAGAGATCGATATGACCAAAGATATTGATGATTGGGAAAAATTAACC 131548
|||||||| | |||||| || ||| || | || |||||| |||| ||| | || ||
Sbjct 379975 TTCTGGACCGCTGAAGAAATTGATTTGTCTAAGGATATTCATGACTGGAACAACAGAA-- 380032
Query 131549 TTGAATGAAAAAGA------TTTTGTTTCCAAAGTTCTTGCATTCTTCGCCGGAAGTGAT 131602
|||| ||||| || |||| |||| | ||||||||| || ||||||| |||
Sbjct 380033 -TGAACGAAAACGAGAGATTTTTTATTTCTAGAGTTCTTGCCTTTTTCGCCGCTTCTGAC 380091
Query 131603 GGCATTGTTATTGAAAATCTTGTTATTAATTTCATTCAA-GAAATTGATATTCCTGAAGT 131661
|| ||||||| |||||| | ||| || ||| | || ||| || | ||||| || |
Sbjct 380092 GGTATTGTTAATGAAAACTTGGTTGAAAACTTC-TCCACCGAAGTTCAAATTCCAGAGGC 380150
Query 131662 AACATCGTTCTACACATTTCAAGCCGCTGTTGAATCTATTCATAGCGAGATGTATTCATT 131721
|| ||||| || ||| | ||||| ||||||| || | || || ||
Sbjct 380151 AAAGAGTTTCTATGGTTTCCAAATCATGATTGAAAATATTCATTCTGAAACTTACTCCTT 380210
Query 131722 ATTGATTGAGAGTCTTGTTAAAAATGAAGATGATAAAAATAAATTATTTG---ATGCTGT 131778
|||||| || | || | || || | | ||| | |||| || |||| |
Sbjct 380211 ATTGATCGATAC-CTACATCAAG--GACCCTAAGGAAAGTGAATTCTTGTTCAATGCCAT 380267
Query 131779 AAATAAATTTCCTGCAATTAAAAAGAAAGCAGAATGGGCTATTAAATGGATTCAAGATGA 131838
| | | || | ||| |||| || || |||||| | | |||||||||||| |
Sbjct 380268 TCACACTATCCCAGAAATCGGTGAGAAGGCCGAGTGGGCTCTAAGATGGATTCAAGACGC 380327
Query 131839 TTCCGCTAATTTTTCTACAAGACTTGTAGCTTTTGCTTGTGTTGAAGGTATATTCTTTTC 131898
| ||| ||| | |||||| || || ||||||| | | |||||| | ||||| ||
Sbjct 380328 TGACGCCTTGTTTGGTGAAAGACTAGTCGCCTTTGCTTCTATCGAAGGTGTCTTCTTCTC 380387
Query 131899 AGGTGCTTTCTGTGCTATCTTTTGGCTTAAGAAGCGTGGATTGATGCCTGGACTCTCATT 131958
||| | ||| | || || ||| | |||||| | || ||||||| || | | ||
Sbjct 380388 CGGTTCCTTCGCCTCCATTTTCTGGTTGAAGAAGAGAGGTATGATGCCAGGTTTGACCTT 380447
Query 131959 GTCCAATCAATTCATCTCGAGAGATGAAGCATTGCATACTGAATTTGC 132006
|| || |||| || | ||||| |||| ||||| || || |||||
Sbjct 380448 CTCTAACGAATTGATTTGCAGAGACGAAGGTTTGCACACCGACTTTGC 380495
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1186812541497337
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |