Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079145.1_202017-03- 21] 17 sequences; 12,214,669 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq15 86.0 5e-12 >seq15 Length=1201643 Score = 86.0 bits (94), Expect = 5e-12 Identities = 206/312 (66%), Gaps = 0/312 (0%) Strand=Plus/Minus Query 41103 CTGTCATGTCAATTGTATCAAAGATCAGGTGACATGGGACTAGGGGTCCCGTTTAACATA 41162 || |||||| || || ||| | || |||||||||| | || || || ||||| || Sbjct 565460 CTTTCATGTTTGTTATACCAACGTTCTTGTGACATGGGGTTGGGCGTACCATTTAATATT 565401 Query 41163 GCGAGTTATGCTCTGCTCACGTATATGATTGCACACGTTACCAATTTAAAACCTGGTGAA 41222 || ||||||||| | || |||||||| | ||| | | | | || ||||| Sbjct 565400 GCATCATATGCTCTGTTGACTAGAATGATTGCTAAAGTTGTCGACATGGAGCCAGGTGAG 565341 Query 41223 TTTGTTCACACGTTAGGAGATGGACATATTTACATTAATCACATAGAGCCGTTAACAGAA 41282 ||| |||| || | || |||| |||| |||| | | ||||| || | || | |||| Sbjct 565340 TTTATTCATACTCTGGGGGATGCACATGTTTATAAGGACCACATTGAAGCCTTGAAAGAA 565281 Query 41283 CAACTGACACGAAAACCTAGACCATTTCCAACGCTACTTATTAAACGCGCTGTTGAAAAC 41342 ||| | || || | || ||||||||||| | ||| |||| | | | | || || Sbjct 565280 CAAATCACCAGAGATCCAAGACCATTTCCGAAACTAAAGATTAGAAGGGACATAAAAGAC 565221 Query 41343 ATTGATGATTTTTGCATCGATGATTTTGTCGTTTGCGATTACAATCCGTACCCTAAAATC 41402 ||||||||||| | || || || | || ||||| ||||| |||| | ||| Sbjct 565220 ATTGATGATTTCAAGTTGGAAGACTTCGAAATTGAAGATTATAATCCTCACCCAAGAATT 565161 Query 41403 CACATGGACATG 41414 || ||| | ||| Sbjct 565160 CAAATGAAAATG 565149 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397455917652085