Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079145.1_202017-03-
21] 17 sequences; 12,214,669 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq5 235 6e-57
seq15 145 9e-30
seq16 91.5 2e-13
>seq5
Length=577572
Score = 235 bits (260), Expect = 6e-57
Identities = 829/1278 (65%), Gaps = 44/1278 (3%)
Strand=Plus/Plus
Query 104330 CCAACCCTCTTCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCC 104389
||||| | || ||||||||||| |||| ||| ||||||||| ||| ||| | |||||
Sbjct 305369 CCAACTTTGTTTAATGCTGGTACTCCAAAACCTCAAATGTCCTCTTGTTTCTTGGTCGCC 305428
Query 104390 AACAAGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCA 104449
| ||||||||||| ||| | ||||| || | ||| | | || ||||| || ||
Sbjct 305429 ATGAAGGAGGACTCTATCGAGGGTATTTACGACACTTTGAAAGAATGTGCTTTGATTTCC 305488
Query 104450 AAGTGGGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATT 104509
|| ||||| |||||||| | || |||||| | | | | | | ||| |||
Sbjct 305489 AAAACTGCTGGTGGTATTGGTCTACATATCCATAACATTCGTTCAACTGGTTCTTACATT 305548
Query 104510 CGGGGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACA 104569
|| ||||| ||| || | || | ||||| ||| |||| || ||||| ||
Sbjct 305549 GCTGGTACAAACGGTACTTCTAACGGGTTAATTCCCATGATTCGTGTTTTTAATAATACC 305608
Query 104570 GCGCGCTATGTAAATCAAGCTGGGCGTCGAAAG----GGATCTATCGCAGTCTATCTTGA 104625
|| || ||||| | || | | || | |||| || | | || | || || ||
Sbjct 305609 GCCCGTTATGTCGACCAGGGT-GGTAACAAAAGACCTGGTGCCTTTGCTCTGTACCTGGA 305667
Query 104626 GCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGA 104685
|||||||| || |||||| | || || |||| | | ||||| ||| | || ||
Sbjct 305668 ACCATGGCATGCTGATATCTTTGATTTTATTGATATCAGAAAGAACCACGGTAAAGAAGA 305727
Query 104686 GGCGCGGTGC-CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAG 104744
| |||| | ||| | || | ||||| |||||||| ||||| ||||||||| | |
Sbjct 305728 AATTC-GTGCAAGAGATTTGTTTCCTGCTCTGTGGATTCCTGATCTTTTCATGAAGCGTG 305786
Query 104745 TTGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACA-AGGCACCTGGTCTCTCCGAT 104803
| || |||| ||| | |||| || | || | |||| ||| || || ||||| |||
Sbjct 305787 TCGAAGAGAATGGGACTTGGACTTTGTTCTCTCCA-ACAGCCGCTCCCGGTCTAAGCGA- 305844
Query 104804 GCCGT--GGGTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGA 104861
| || ||||| ||||||||||| || || || ||||| |||||||||| |
Sbjct 305845 -CTGTTACGGTGACGAGTTTGAAGCTCTATATACCCGCTACGAAAAAGAAGGTCGTG--- 305900
Query 104862 CTGCGACGGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTG 104921
| ||| | |||| | | ||| | | ||| | | | ||||| || || |
Sbjct 305901 GTAAGACCATTAAAGCTCAAAAATTATGGTATTCCATTTTGGAAGCACAAACTGAAACGG 305960
Query 104922 GTACACCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGG 104981
||||||| | || |||| ||||| || || ||| |||| ||| ||||| || ||||
Sbjct 305961 GTACACCTTTTGTGGTTTATAAAGATGCTTGCAACAGAAAGTCTAACCAAAAAAACTTGG 306020
Query 104982 GTGTGATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGA 105041
|||| |||||| || || | || ||||| | || | ||| || || |
Sbjct 306021 GTGTTATCAAGTCATCAAACTTATGCTGTGAAATTGTTGAGTACTCAGCTCCGGACGAAA 306080
Query 105042 CGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGT--ATGTGGATC--CAGA---- 105093
| ||||| |||||| | || || | || | || || || || | | ||||
Sbjct 306081 CTGCTGTTTGTAACTTGGCTTCCGTTGCCTTGCCAGCGTTCAT-TGAAACGTCAGAGGAC 306139
Query 105094 -GACAAA----GACATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAA 105148
| |||| || | | | ||||| | |||||| || | ||| ||| ||
Sbjct 306140 GGCCAAACTTCTACTTACAACTTCAAAAAATTACACGAAATTGCCAAAGTTGTTACTCGT 306199
Query 105149 AACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAAT 105208
|| ||||||||||||||||| | |||| ||||| ||||| || | | ||| |||
Sbjct 306200 AATTTAAACAGAGTTATTGATCGTAATTACTACCCTGTTGAAGAAGCGAGAAGATCCAAT 306259
Query 105209 ATGAGACACCGTCCAATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCA-TTCTTTG 105267
|||||||| | ||||||| | |||||||| ||| | || || || || | ||
Sbjct 306260 ATGAGACATAGACCAATTGCCTTGGGTGTTCAAGGTTTAGCTGA------CACTTTTATG 306313
Query 105268 TCGCCACG-----CATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAG 105322
| || ||| | |||||||| || || || | | ||| | ||||||||
Sbjct 306314 TTGCTACGTTTACCCTTTGATTCTGAAGAGGCCCGTTTACTAAATATCCAAATATTTGAA 306373
Query 105323 ACCATGTATCACGCCGCTCTTGAGGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATAT 105382
|| || ||||| ||| | | || || || || | || | || || |||||
Sbjct 306374 ACAATTTATCATGCCTCCATGGAAGCTTCTTGTGAACTAGCTCAAAAGGACGGCCCATAC 306433
Query 105383 GAAACCTTTGAGGGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGT 105442
|||||||| | |||||||||||||| ||||| | ||||| || |||||||||| |
Sbjct 306434 GAAACCTTCCAAGGTTCTCCAGCTTCTCAAGGTATACTTCAGTTCGATATGTGGG-ATCA 306492
Query 105443 GAGACCAAGCTTCA-CTACGACTGGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCT 105501
| ||| | || | || ||||| || | | | || |||| | | | ||| |
Sbjct 306493 AAAACCCTACGGCATGTGGGATTGGGACACTTTGAGGAAAGATATCATGAAACATGGTAT 306552
Query 105502 TCGTAACAGTCTCCTCATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAA 105561
| | ||| | | |||||| |||||||| || || ||||| | ||||| |||||| |
Sbjct 306553 TAGAAACTCTTTGACCATGGCACCAATGCCTACCGCATCCACATCCCAAATATTGGGTTA 306612
Query 105562 TAATGAATGCTTTGAACC 105579
||||||||| ||||||||
Sbjct 306613 TAATGAATGTTTTGAACC 306630
>seq15
Length=1201643
Score = 145 bits (160), Expect = 9e-30
Identities = 882/1392 (63%), Gaps = 56/1392 (4%)
Strand=Plus/Minus
Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTC 104281
|||||| || || | ||||| ||||| | ||||| || || || ||||| |||||
Sbjct 236297 CCACAGCACTTGGTTATGCGTGTGGCGCTGGGTATCCACGGTAGTGATATTGAGTCTGTG 236238
Query 104282 TTGGAGACATACGACAAGATGTCCC-AAGGTATGTTCATTCACGCAACACCAACCCTCTT 104340
|| |||| ||| | |||||| ||| ||| |||| |||||| | |||||| | ||
Sbjct 236237 CTGAAGACCTACAATTTGATGTCGTTAAGATAT-TTCACTCACGCTTCCCCAACCTTATT 236179
Query 104341 CAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 104400
||| |||||||| ||| ||||||||||| || ||||| || |||| ||||| ||
Sbjct 236178 CAACGCTGGTACTCCACATCCCCAAATGTCTTCATGTTTCCTAATTGCCATGAAGGATGA 236119
Query 104401 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 104460
||| || | ||||| |||| ||| | | || ||||| || || ||| || ||
Sbjct 236118 CTCTATTGAAGGTATTTATGATACTTTGAAAGAATGTGCTATGATTTCCAAGACTGCAGG 236059
Query 104461 GGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAA 104520
||| |||| | || || | | | | ||| ||| ||| || || ||
Sbjct 236058 TGGTGTTGGTCTTCATATTAACAACATCCGTTCCACAGGTTCTTATATCGCCGGTACCAA 235999
Query 104521 TGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGT 104580
||| ||| |||| | ||||| ||| | || || || ||| || || || |||||
Sbjct 235998 CGGTACTTCAAATGGGTTGATTCCTATGATCCGTGTTTTCAACAATACTGCTCGTTATGT 235939
Query 104581 AAATCAAGCTGGGCGTCGAAAGGGATCTATCGCAGT-----CTATCTT-GAGCCATGGCA 104634
| ||| || || ||| || || ||| | | |||| || ||||||||
Sbjct 235938 GGACCAA---GGAGGTAACAAGAGACCTGGCGCCTTTGCCCTTTTCTTGGAACCATGGCA 235882
Query 104635 CGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGTG 104694
|| |||||| | || || | || | | | ||| ||| | || || | |||
Sbjct 235881 TGCAGATATCTTCGACTTTGTCGATATTAGAAAAACCCATGGTAAAGAAGA-AATCCGTG 235823
Query 104695 C-CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGA 104753
| | ||| | ||| | ||||| |||||||| || || || ||||| | ||| | |||
Sbjct 235822 CAAGGGATTTGTTCCCTGCTCTGTGGATTCCTGACCTTTTTATGAAACGTGTTCAAGAGG 235763
Query 104754 GTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGTG 104813
||| ||| || | |||| ||| || || ||| | |||| | |||||
Sbjct 235762 ATGGGCCCTGGACTTTATTTTCTCCCAGTGCTGCCCCAGGTTTAGATGATGTCTGGGGTG 235703
Query 104814 AGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGACGGTGC 104873
| || ||||||| || || || ||||| |||||||| | | || |
Sbjct 235702 ATGAATTTGAAGAGCTATATACCCGTTACGAAAGGGAAGGTCGTG---GTAAAACCATTA 235646
Query 104874 CAGCTGCCGATGTGTGGAAAGCTATTCT-CAAGTCTCAAACCGAGACTGGTACACCATAC 104932
|| | | ||| | || ||| | |||| | ||||| || || |||||||| | |
Sbjct 235645 AGGCCCAAAAGTTATGGTATGCAATTTTACAAG-CACAAACAGAAACAGGTACACCTTTC 235587
Query 104933 ATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAG 104992
||| ||||||| ||| | ||||| ||||| || ||| |||| |||||| || ||
Sbjct 235586 ATGGTTTACAAGGACTCATGTAATAGAAAGACAAACCAACAGAACTTGGGTACCATTAAA 235527
Query 104993 AGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGT 105052
|||||| | ||| |||||| | || | | | | |||||| || || || |||
Sbjct 235526 TCATCCAATTTGTGTTGTGAAATCGTCGAGTATTCCTCCCCAGATGAAACCGCCGTTTGT 235467
Query 105053 AACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGA-GAC-AAAGA--------- 105101
|| || || || || || ||||| || || || || ||| | | ||||
Sbjct 235466 AATCTAGCCTCTATTGCCCTCCC--AGCATTTG--TCGAGATGTCTGAAGATGGTAAAAC 235411
Query 105102 --CA---TTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAA 105156
|| | | ||| || | | || ||| || | ||| | ||| | ||| | ||
Sbjct 235410 TGCAAGTTATAATTTCGAGAGTTTACATGAAATTGCTAAAGTAATTACCCATAACTTGAA 235351
Query 105157 CAGAGTTATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACA 105216
|||||| || ||| | |||| ||| || ||| || | || || ||||||| ||
Sbjct 235350 CAGAGTCATCGATCGTAATTATTATCCAGTTCCTGAAGCCAGAAATTCAAATATGAAGCA 235291
Query 105217 CCGTCCAATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGC 105276
| || |||| | |||||||| ||||| || ||| | || | | || | |
Sbjct 235290 TAGACCTATTGCCTTGGGTGTTCAAGGTCTGGCCGATACCTATATGATGTTGCGTCTACC 235231
Query 105277 ATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGC 105336
||||| || || ||||| | | || | || || || ||||| ||||| ||
Sbjct 235230 CTTTGAATCGGAAGAAGCTCAAACTTTGAACAAACAGATTTTCGAAACCATCTATCATGC 235171
Query 105337 CGCTCTTGAGGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGG 105396
||||||| || | || |||||| || || ||| ||| || || || ||
Sbjct 235170 TACTCTTGAAGCCTCCTGTGAATTGGCACAGAAGGAAGGTAAGTATTCCACTTTCGAAGG 235111
Query 105397 TTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCTTCA 105456
||||||||| || | || | || |||||||| |||||| | | | || ||| ||
Sbjct 235110 TTCTCCAGCCTCTAAGGGTATTCTACAATTTGACATGTGGAACGCTAAG-CCA---TTTG 235055
Query 105457 CTA----CGACTGGGAAGCTCTCAAGGAACG-CA---TCAAGGAGAAGGGTCTTCGTAAC 105508
|| || |||||| ||| ||| || | || |||| | | || | | | |||
Sbjct 235054 GTATGTGGGATTGGGAA-ATCTTAAGAAAGGACATAGTCAA--ACATGGAT-TAAGAAAC 234999
Query 105509 AGTCTCCTCATGGCTCCAATGCCAACAGCCTCCACCGCACAAA-TCTTGGGTAATAATGA 105567
| | ||||| ||||||||||| ||||| || | |||| |||||||| |||| ||
Sbjct 234998 TCTTTAACAATGGCGCCAATGCCAACTGCCTCGACTTCTCAAATTCTTGGGT-ATAACGA 234940
Query 105568 ATGCTTTGAACC 105579
||| ||||||||
Sbjct 234939 ATGTTTTGAACC 234928
>seq16
Length=1029411
Score = 91.5 bits (100), Expect = 2e-13
Identities = 116/160 (73%), Gaps = 0/160 (0%)
Strand=Plus/Plus
Query 154116 TTGCGCCACGATCTGGTCTCGCTGTGAAACATGGTATCCAAGTTGGTGCGGGTGTTGTTG 154175
|||||||| |||| || || || |||||| | ||||| ||| ||||| ||||||||||
Sbjct 943712 TTGCGCCAAGATCAGGCCTAGCAGTGAAAAACGGTATTCAAACCGGTGCTGGTGTTGTTG 943771
Query 154176 ATCCCGACTACACGGGTGAAGTCAAAGTCGTTCTTTTCAATCACGGAGACAAAGACTTTG 154235
| || ||||| |||||||| ||||| || | ||||||||| | | | ||| || |
Sbjct 943772 ACAGAGATTACACTGGTGAAGTTAAAGTAGTCTTATTCAATCACTCACAGAGAGATTTCG 943831
Query 154236 AGGTAAAGAGGGGTGAGCGCATCGCACAACTTGTTCTTGA 154275
| |||| ||||| ||| | || ||| | |||| ||
Sbjct 943832 CCATCAAGAAAGGTGATCGCGTAGCCCAATTAATTCTCGA 943871
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583260676057080
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