Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079145.1_202017-03-
21] 17 sequences; 12,214,669 total letters
Query= NC_029304.1
Length=111246
Score E
Sequences producing significant alignments: (Bits) Value
seq14 98.7 7e-16
seq12 89.7 4e-13
seq11 82.4 5e-11
>seq14
Length=872155
Score = 98.7 bits (108), Expect = 7e-16
Identities = 163/233 (70%), Gaps = 12/233 (5%)
Strand=Plus/Minus
Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849
|||||||||||||| |||||||| ||||| ||| ||| || | || || ||| ||
Sbjct 57112 ATGCAAATTTTTGTCAAAACTCTAACTGGCAAAACTATAACCCTAGAGGTTGAATCTTCC 57053
Query 27850 GACGATGT--ACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907
||| | | |||| ||||| |||||| |||||||||||| |||| || |
Sbjct 57052 GACACTATTGACAAC--GTCAAGTCAAAAATTCAGGACAAAGAAGGTATTCCTCCAGACC 56995
Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACG----AACGCAGCTTGTCCGAT 27963
| || | || ||||||||||| || ||| |||| || | ||||| |||| |||
Sbjct 56994 AACAGAGATTGATTTTTGCCGGTAAGCAACTGGAAGATGGTAGAACGC----TGTCTGAT 56939
Query 27964 TACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016
|| ||||| || ||||| ||||||||||| || || | ||| | || ||
Sbjct 56938 TATAACATTCAGAAAGAATCTACTTTGCATTTAGTGCTGAGATTGAGAGGTGG 56886
Score = 87.8 bits (96), Expect = 1e-12
Identities = 158/229 (69%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849
||||| || ||||| || || || ||||| || |||||| | || |||||| ||
Sbjct 57340 ATGCAGATCTTTGTCAAGACGCTGACTGGTAAGACTATTACTCTGGAGGTCGAATCTTCC 57281
Query 27850 GAC--GATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907
||| ||| |||| ||||| |||||| || || |||||| |||| || |
Sbjct 57280 GACACGATCGACAAC--GTCAAGTCAAAAATTCAAGATAAGGAAGGTATTCCTCCAGACC 57223
Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967
| || | || ||||||||||| |||||| |||| || | | | || ||||||||||
Sbjct 57222 AACAGAGATTGATTTTTGCCGGTAAACAACTGGAAGATGGCAGAACGTTATCCGATTACA 57163
Query 27968 ACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016
| || ||||| ||| ||| | || ||||| ||| | ||| | || ||
Sbjct 57162 ATATTCAAAAGGAGTCTACTCTTCACTTGGTCTTGAGATTGAGAGGTGG 57114
>seq12
Length=1068413
Score = 89.7 bits (98), Expect = 4e-13
Identities = 160/232 (69%), Gaps = 4/232 (2%)
Strand=Plus/Plus
Query 27787 AAAATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGC 27846
|| ||||||||||| || || ||| | || || || |||||| | || || |||
Sbjct 493583 AAGATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTAGAAGTTGAATCT 493642
Query 27847 ACCGACGATGT--ACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGG 27904
| ||| | | ||||| ||||| || || ||||| |||||| | || |
Sbjct 493643 TCTGACACTATTGACAAT--GTCAAGTCCAAGATCCAAGACAAGGAAGGTATCCCACCTG 493700
Query 27905 AGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATT 27964
| || ||| | || || ||||| || || |||||||| || | | | |||||| || |
Sbjct 493701 ACCAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGCAGAACCTTGTCTGACT 493760
Query 27965 ACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016
|||||||||||||||| ||||||||| ||||| ||| | ||| | || ||
Sbjct 493761 ACAACATCCAAAAAGAATCCACTTTGCACTTGGTCTTGAGATTGAGAGGTGG 493812
>seq11
Length=805821
Score = 82.4 bits (90), Expect = 5e-11
Identities = 90/120 (75%), Gaps = 0/120 (0%)
Strand=Plus/Minus
Query 27883 GACAAAGAAGGTGTTCCGATGGAGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGAC 27942
||||| |||||| | || || || ||| | || || |||||||| || ||||||||
Sbjct 742860 GACAAGGAAGGTATCCCACCTGACCAACAAAGATTGATCTTTGCCGGTAAGCAATTGGAA 742801
Query 27943 GACGAACGCAGCTTGTCCGATTACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTG 28002
|||| | | || || || |||||||||||||| || |||||| ||||||||||||
Sbjct 742800 GACGGTAGAACTTTATCTGACTACAACATCCAAAAGGAATCCACTTTACATTTGGTTTTG 742741
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 355862326269759
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |