Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079145.1_202017-03-
21] 17 sequences; 12,214,669 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq14 147 5e-30
seq12 107 4e-18
seq11 105 2e-17
>seq14
Length=872155
Score = 147 bits (162), Expect = 5e-30
Identities = 158/208 (76%), Gaps = 1/208 (0%)
Strand=Plus/Plus
Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956
|||| |||||||||||||| ||||| || |||||||||| ||| ||||| |||||||| |
Sbjct 57134 CAAG-TGAAGAGTAGACTCCTTTTGAATATTGTAATCGGATAACGTTCTGCCATCTTCCA 57192
Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016
| ||| ||||| || || | ||||| ||||| | | || |||||||| |||||||
Sbjct 57193 GTTGTTTACCGGCAAAAATCAATCTCTGTTGGTCTGGAGGAATACCTTCCTTATCTTGAA 57252
Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076
||||| ||||| | || | |||| ||| || || || ||||||||||| || |
Sbjct 57253 TTTTTGACTTGACGTTGTCGATCGTGTCGGAAGATTCGACCTCCAGAGTAATAGTCTTAC 57312
Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104
| || || ||||| || |||| ||||||
Sbjct 57313 CAGTCAGCGTCTTGACAAAGATCTGCAT 57340
Score = 136 bits (150), Expect = 9e-27
Identities = 156/210 (74%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 151895 GACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTC 151954
||| || || |||||||| || ||||| |||||||| |||| ||| ||||| ||||||||
Sbjct 56675 GACCAGGTGGAGAGTAGATTCCTTTTGAATGTTGTAGTCGGATAATGTTCTACCATCTTC 56734
Query 151955 TAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTG 152014
|| ||| ||||| || || | ||||| ||||| | | || |||||||| |||||
Sbjct 56735 CAGTTGTTTACCGGCAAAAATCAATCTCTGTTGGTCTGGAGGAATACCTTCCTTATCTTG 56794
Query 152015 AATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTT 152074
||||||| ||||| | || | |||| ||| || || || || || ||||| ||
Sbjct 56795 AATTTTTGACTTGACGTTGTCAATAGTGTCGGAAGATTCGACCTCGAGGGTTATAGTCTT 56854
Query 152075 GCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || || ||||| ||||||| ||||||
Sbjct 56855 ACCAGTCAGCGTCTTAACGAAGATCTGCAT 56884
Score = 102 bits (112), Expect = 2e-16
Identities = 152/216 (70%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 151889 TCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCC 151948
||| || || | ||| | |||||| ||||| || ||||| ||||| | | ||||| ||
Sbjct 56897 TCTCAGCACTAAATGCAAAGTAGATTCTTTCTGAATGTTATAATCAGACAGCGTTCTACC 56956
Query 151949 ATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTT 152008
|||||| || || ||||| || || | ||||| ||||| | | || ||||| ||
Sbjct 56957 ATCTTCCAGTTGCTTACCGGCAAAAATCAATCTCTGTTGGTCTGGAGGAATACCTTCTTT 57016
Query 152009 TTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAAT 152068
|| ||||||||| ||||| | || | |||| ||| || || || || || ||
Sbjct 57017 GTCCTGAATTTTTGACTTGACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTAT 57076
Query 152069 AGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
||||||||| || ||||| || || || | |||||
Sbjct 57077 AGTTTTGCCAGTTAGAGTTTTGACAAAAATTTGCAT 57112
>seq12
Length=1068413
Score = 107 bits (118), Expect = 4e-18
Identities = 151/211 (72%), Gaps = 1/211 (0%)
Strand=Plus/Minus
Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956
|||| || | ||| || ||||||||||||||||| || | || ||||| |||||||| |
Sbjct 493792 CAAG-TGCAAAGTGGATTCTTTTTGGATGTTGTAGTCAGACAAGGTTCTGCCATCTTCCA 493734
Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016
|| || || ||||| | || || ||||| | | ||| |||||||| ||||| |
Sbjct 493733 ATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTTGTCTTGGA 493674
Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076
| || |||||| | || | |||| ||| || ||||| || |||||||| || |
Sbjct 493673 TCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCTAGGGTAATAGTCTTAC 493614
Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107
| || | |||||| ||||| | ||||| ||
Sbjct 493613 CGGTTAAAGTCTTGACGAAAATTTGCATCTT 493583
>seq11
Length=805821
Score = 105 bits (116), Expect = 2e-17
Identities = 141/196 (72%), Gaps = 0/196 (0%)
Strand=Plus/Plus
Query 151901 ATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCT 151960
||| | ||| || || |||||||||||||| || | ||||||||| || ||||| |
Sbjct 742750 ATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGATAAAGTTCTACCGTCTTCCAATTG 742809
Query 151961 TTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTT 152020
|| ||||| ||||| | || || ||||| | | ||| |||||||| ||||| || ||
Sbjct 742810 CTTACCGGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTTGTCTTGGATCTT 742869
Query 152021 TTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGT 152080
|||||| | || | | |||| ||| || ||||| | ||| || || || || ||
Sbjct 742870 GGACTTGACATTGTCAATGGTGTCAGAAGATTCAACTTCTAAAGTGATGGTCTTACCAGT 742929
Query 152081 GAGAGTCTTCACGAAG 152096
| |||||| ||||||
Sbjct 742930 CAAAGTCTTAACGAAG 742945
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1153820548683407
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |