Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079145.1_202017-03-
21] 17 sequences; 12,214,669 total letters
Query= NC_032001.1
Length=327147
Score E
Sequences producing significant alignments: (Bits) Value
seq12 179 8e-40
seq11 176 9e-39
seq15 165 2e-35
seq14 161 2e-34
>seq12
Length=1068413
Score = 179 bits (198), Expect = 8e-40
Identities = 169/213 (79%), Gaps = 2/213 (1%)
Strand=Plus/Minus
Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG-CAAGCGTGCGGCCATCCTC 282949
|||| || || ||| ||||||||||||||||||||||| |||| || | |||||| ||
Sbjct 493794 ACCAAGTGCAAAGTGGATTCTTTTTGGATGTTGTAGTCAGACAAG-GTTCTGCCATCTTC 493736
Query 282950 TAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTG 283009
| ||| || || ||||||||||| | |||||||||| || ||||| |||||||||||
Sbjct 493735 CAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTTGTCTTG 493676
Query 283010 GATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTT 283069
|||||| | || || | || |||||||| |||| ||| ||||| || || || |||||
Sbjct 493675 GATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCTAGGGTAATAGTCTT 493616
Query 283070 ACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102
||| || |||||||| ||||| || ||||| ||
Sbjct 493615 ACCGGTTAAAGTCTTGACGAAAATTTGCATCTT 493583
>seq11
Length=805821
Score = 176 bits (194), Expect = 9e-39
Identities = 159/200 (80%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCT 282950
|||| |||||| ||| ||| ||||||||||||||||||| | || | || || ||
Sbjct 742745 ACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGATAAAGTTCTACCGTCTTCC 742804
Query 282951 AGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGG 283010
| ||| || |||||||||||||| | |||||||||| || ||||| ||||||||||||
Sbjct 742805 AATTGCTTACCGGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTTGTCTTGG 742864
Query 283011 ATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTA 283070
||||| | || || | || || ||||| |||| ||| ||||| | |||||| ||||||
Sbjct 742865 ATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCAACTTCTAAAGTGATGGTCTTA 742924
Query 283071 CCCGTCAAAGTCTTAACGAA 283090
|| |||||||||||||||||
Sbjct 742925 CCAGTCAAAGTCTTAACGAA 742944
>seq15
Length=1201643
Score = 165 bits (182), Expect = 2e-35
Identities = 155/195 (79%), Gaps = 2/195 (1%)
Strand=Plus/Minus
Query 282897 TGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG-CAAGCGTGCGGCCATCCTCTAGTTG 282955
||||| ||| ||||||||| ||||||||||||| |||| || | || || || | |||
Sbjct 71281 TGTAAAGTGGATTCTTTTTGAATGTTGTAGTCAGACAAG-GTTCTACCGTCTTCCAATTG 71223
Query 282956 TTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTT 283015
|| || ||||||||||| | |||||||||| || ||||| ||||||||||| |||||
Sbjct 71222 CTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTTGTCTTGAATCTT 71163
Query 283016 TGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGT 283075
|| || || | || |||||||| |||| ||| ||||| | |||||| |||||||| ||
Sbjct 71162 TGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGATGGTCTTACCAGT 71103
Query 283076 CAAAGTCTTAACGAA 283090
||||||||| || ||
Sbjct 71102 CAAAGTCTTGACAAA 71088
>seq14
Length=872155
Score = 161 bits (178), Expect = 2e-34
Identities = 151/192 (79%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967
||| ||||| ||||||||||| | | || | ||||| || |||||||| ||||||||
Sbjct 56693 TTCCTTTTGAATGTTGTAGTCGGATAATGTTCTACCATCTTCCAGTTGTTTACCGGCAAA 56752
Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027
||||| | |||||||| |||||||| ||||| ||||| || |||| || ||| |
Sbjct 56753 AATCAATCTCTGTTGGTCTGGAGGAATACCTTCCTTATCTTGAATTTTTGACTTGACGTT 56812
Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087
|| |||||||| |||| |||||| ||||| || || |||||||| |||| ||||||||
Sbjct 56813 GTCAATAGTGTCGGAAGATTCGACCTCGAGGGTTATAGTCTTACCAGTCAGCGTCTTAAC 56872
Query 283088 GAATATCTGCAT 283099
||| ||||||||
Sbjct 56873 GAAGATCTGCAT 56884
Score = 136 bits (150), Expect = 8e-27
Identities = 167/228 (73%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
|||||| | || | || || | ||| || || |||||| || ||||| || ||||
Sbjct 57341 ACCACCTCTCAATCTCAGCACTAAATGCAAGGTAGATTCTTTCTGAATGTTATAATCAGA 57400
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
|| || | ||||| || ||||| || |||||||| ||||| | |||||||| ||
Sbjct 57401 CAGTGTTCTACCATCTTCCAGTTGCTTACCGGCAAAAATCAACCTCTGTTGGTCTGGAGG 57460
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
|||||| || ||||| || || |||| || ||| |||| || || || |||| ||||||
Sbjct 57461 AATACCTTCTTTGTCCTGAATTTTTGACTTGACGTTATCAATGGTATCAGAAGATTCGAC 57520
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
||| | || || || ||||| ||||||||||| || || || |||||
Sbjct 57521 TTCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACAAAAATTTGCAT 57568
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1046738972007118
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |