Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079145.1_202017-03- 21] 17 sequences; 12,214,669 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq10 159 4e-34 >seq10 Length=751133 Score = 159 bits (176), Expect = 4e-34 Identities = 383/575 (67%), Gaps = 11/575 (2%) Strand=Plus/Minus Query 23500 AACAATAAACATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAA 23559 |||||||| |||||||| || || | ||||| || || | ||||||||| ||||| Sbjct 380507 AACAATAAGCATGCAAAGTCGGTGTGCAAACCTTCGTCTCTGCAAATCAATTCGTTAGAG 380448 Query 23560 AATGTTAATCCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCG 23619 || || || |||||||| | |||| || || | ||| || || | || || || ||| Sbjct 380447 AAGGTCAAACCTGGCATCATACCTCTCTTCTTCAACCAGAAAATGGAGGCGAAGGAACCG 380388 Query 23620 GAAAAGAAAATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTA 23679 || ||||| | ||| || | || |||||||| || || | | |||||| || | | Sbjct 380387 GAGAAGAAGACACCTTCGATAGAAGCAAAGGCGACTAGTCTTTCACCAAACAAGGCGTCA 380328 Query 23680 TAATCAGAAATCCAtttttttGTCCAATTAGCCTTCAATTTTACACACTCA----ATTGT 23735 || ||||||| || | ||| | |||||| | || | | || || Sbjct 380327 GCGTCTTGAATCCATCTTAGAGCCCACTCGGCCTTC----TCACCGATTTCTGGGATAGT 380272 Query 23736 TTCAATTGCTTTTAAGAGAAAAGTTTTTTCTTCATTATCTGTTATATATGTATCAATTAG 23795 | ||| || || || | || |||| | | || | || || ||||| || | Sbjct 380271 GTGAATGGCATTGAACAAGAATTCACTTTCCTTAGGGTCCTTGATGTAGGTATCGATCAA 380212 Query 23796 TAAACTATACATTTCAGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACATCT 23855 ||| || |||||||||||||||||||||| || || || ||||| |||| | Sbjct 380211 TAAGGAGTAAGTTTCAGAATGAATATTTTCAATCATGATTTGGAAACCATAGAAACTCTT 380152 Query 23856 AGCTTCAGACAATTGAACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAATACC 23915 || || | | |||||| || | | || ||| | | || ||||| ||||||||||| Sbjct 380151 TGCCTCTGGAATTTGAACTTCGGTGGAGAAGTTTTCAACCAAGTTTTCATTAACAATACC 380092 Query 23916 ATCACTAGCAGCAAAGAAAGCAAGAAC-ATA-TTTTATAAAATGTCTTTCATCAGTTGAT 23973 ||| ||| || || || |||||||| || || ||||| ||| | ||| || Sbjct 380091 GTCAGAAGCGGCGAAAAAGGCAAGAACTCTAGAAATAAAAAATCTCTCGTTTTCGTTCAT 380032 Query 23974 AAT-TTTTTCCAATCATTAATATCTTTTGATAAATCAACTTCATCAACTGTCCAAAAACT 24032 | || ||||| |||| |||||| || || ||||||| ||| ||| | ||||| ||| Sbjct 380031 TCTGTTGTTCCAGTCATGAATATCCTTAGACAAATCAATTTCTTCAGCGGTCCAGAAAGA 379972 Query 24033 TGCCAAGGCACGCTTATACATTAGCCAAATATCAT 24067 || |||||||||||| | ||||||| |||| Sbjct 379971 GGCTTCGGCACGCTTATAAGCTTGCCAAATTTCAT 379937 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521487889183800