Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079145.1_202017-03- 21] 17 sequences; 12,214,669 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq12 100 2e-16 seq11 91.5 1e-13 >seq12 Length=1068413 Score = 100 bits (110), Expect = 2e-16 Identities = 163/230 (71%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGG-C 44169 || ||||||| |||||| |||| ||| | ||| || |||||||||||||| || | | Sbjct 493812 CCACCTCTCAATCTCAAGACCAAGTGCAAAGTGGATTCTTTTTGGATGTTGTAGTCAGAC 493753 Query 44170 GAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGG 44229 || | || | || |||| ||||| || ||||||||||| | || || || | || Sbjct 493752 AAGGTTCTGC-CATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGG 493694 Query 44230 CACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCC 44287 | ||||||||| || ||||| ||| || ||| | || ||||| | ||||| Sbjct 493693 GATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGT--CAATAGTGTCAGAAGATTCA 493636 Query 44288 ACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || | ||||| ||||| || || | ||||| ||||| |||||||| Sbjct 493635 ACTTCTAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCAT 493586 >seq11 Length=805821 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/226 (70%), Gaps = 8/226 (4%) Strand=Plus/Plus Query 44108 ATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCG 44167 || || ||||| | |||||| |||| || | ||| ||||||||||||||||| || Sbjct 742724 ATACCACCTCTTAATCTCAAAACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCA 742783 Query 44168 GCGA--GTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTG 44225 | | ||| | |||| |||| ||||| |||||||||||||| | || || || | Sbjct 742784 GATAAAGTT--CTACCGTCTTCCAATTGCTTACCGGCAAAGATCAATCTTTGTTGGTCAG 742841 Query 44226 AAGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGA 44283 || | ||||||||| || ||||| ||| || ||| | |||||||| | || Sbjct 742842 GTGGGATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGT--CAATGGTGTCAGAAGA 742899 Query 44284 TTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAG 44329 ||| || || | || || ||||| || || | ||||| |||||| Sbjct 742900 TTCAACTTCTAAAGTGATGGTCTTACCAGTCAAAGTCTTAACGAAG 742945 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359990325414489