Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079145.1_202017-03- 21] 17 sequences; 12,214,669 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq14 104 2e-17 >seq14 Length=872155 Score = 104 bits (114), Expect = 2e-17 Identities = 153/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 41650 TAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTC 41709 ||| ||||| || || || ||||| |||||||| |||||||| | || | | || Sbjct 56672 TAAGACCAGGTGGAGAGTAGATTCCTTTTGAATGTTGTAGTCGGATAATGTTCTACCATC 56731 Query 41710 GTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTC 41769 || || || || ||||| || |||| | ||||||||| | |||| | ||||| || Sbjct 56732 TTCCAGTTGTTTACCGGCAAAAATCAATCTCTGTTGGTCTGGAGGAATACCTTCCTTATC 56791 Query 41770 CATGATTTTTTGCTTCAACGACGACAC-AGTGTCGCTCGACTCCACCTCCACCGTTATCG 41828 ||| |||||| | ||| | || ||||||| || || ||||| | ||||| | Sbjct 56792 T-TGAATTTTTGACTTGACGTTGTCAATAGTGTCGGAAGATTCGACCTCGAGGGTTATAG 56850 Query 41829 TTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 | ||||| ||||||||||| ||||| |||||||| Sbjct 56851 TCTTACCAGTCAGCGTCTTAACGAAGATCTGCAT 56884 Score = 91.5 bits (100), Expect = 1e-13 Identities = 137/192 (71%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 41672 TCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 41731 || |||||||||||||| || || || || | | || || || ||||| ||||| || Sbjct 56922 TCTTTCTGAATGTTATAATCAGACAGCGTTCTACCATCTTCCAGTTGCTTACCGGCAAAA 56981 Query 41732 ATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGAC 41791 |||| | ||||||||| | |||| | || |||||| ||| |||||| | ||| Sbjct 56982 ATCAATCTCTGTTGGTCTGGAGGAATACCTTCTTTGTCC-TGAATTTTTGACTTGACGTT 57040 Query 41792 GAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTAC 41850 | | | ||||||| || || ||||| | ||||| ||||| || || || || || || Sbjct 57041 GTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTATAGTTTTGCCAGTTAGAGTTTTGAC 57100 Query 41851 GAAAATCTGCAT 41862 ||||| ||||| Sbjct 57101 AAAAATTTGCAT 57112 Score = 84.2 bits (92), Expect = 2e-11 Identities = 136/193 (70%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 41671 CTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 41730 |||||| ||||| || || ||||| | || | | || || || || || ||||| || Sbjct 57149 CTCCTTTTGAATATTGTAATCGGATAACGTTCTGCCATCTTCCAGTTGTTTACCGGCAAA 57208 Query 41731 TATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGA 41790 |||| | ||||||||| | |||| | ||||| || ||| |||||| | ||| Sbjct 57209 AATCAATCTCTGTTGGTCTGGAGGAATACCTTCCTTATCT-TGAATTTTTGACTTGACGT 57267 Query 41791 CGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTA 41849 | | | |||||| || || ||||||| || || || ||||| ||||||||||| | Sbjct 57268 TGTCGATCGTGTCGGAAGATTCGACCTCCAGAGTAATAGTCTTACCAGTCAGCGTCTTGA 57327 Query 41850 CGAAAATCTGCAT 41862 | || |||||||| Sbjct 57328 CAAAGATCTGCAT 57340 Score = 84.2 bits (92), Expect = 2e-11 Identities = 139/196 (71%), Gaps = 10/196 (5%) Strand=Plus/Plus Query 41672 TCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 41731 || |||||||||||||| || || || || | | || || || ||||| ||||| || Sbjct 57378 TCTTTCTGAATGTTATAATCAGACAGTGTTCTACCATCTTCCAGTTGCTTACCGGCAAAA 57437 Query 41732 ATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTG-CTTCAACGA 41790 |||| | ||||||||| | |||| | || |||||| ||| |||||| ||| || Sbjct 57438 ATCAACCTCTGTTGGTCTGGAGGAATACCTTCTTTGTCC-TGAATTTTTGACTT----GA 57492 Query 41791 CGACA-CA---GTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCT 41846 || | || || || || || || |||| ||||| |||||||| |||| |||| Sbjct 57493 CGTTATCAATGGTATCAGAAGATTCGACTTCCAATGTTATGGTTTTACCGGTCAAAGTCT 57552 Query 41847 TTACGAAAATCTGCAT 41862 | || ||||| ||||| Sbjct 57553 TGACAAAAATTTGCAT 57568 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462303901760400