Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079145.1_202017-03-
21] 17 sequences; 12,214,669 total letters
Query= NC_033780.1
Length=144510
Score E
Sequences producing significant alignments: (Bits) Value
seq14 104 2e-17
>seq14
Length=872155
Score = 104 bits (114), Expect = 2e-17
Identities = 153/214 (71%), Gaps = 2/214 (1%)
Strand=Plus/Plus
Query 41650 TAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTC 41709
||| ||||| || || || ||||| |||||||| |||||||| | || | | ||
Sbjct 56672 TAAGACCAGGTGGAGAGTAGATTCCTTTTGAATGTTGTAGTCGGATAATGTTCTACCATC 56731
Query 41710 GTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTC 41769
|| || || || ||||| || |||| | ||||||||| | |||| | ||||| ||
Sbjct 56732 TTCCAGTTGTTTACCGGCAAAAATCAATCTCTGTTGGTCTGGAGGAATACCTTCCTTATC 56791
Query 41770 CATGATTTTTTGCTTCAACGACGACAC-AGTGTCGCTCGACTCCACCTCCACCGTTATCG 41828
||| |||||| | ||| | || ||||||| || || ||||| | ||||| |
Sbjct 56792 T-TGAATTTTTGACTTGACGTTGTCAATAGTGTCGGAAGATTCGACCTCGAGGGTTATAG 56850
Query 41829 TTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
| ||||| ||||||||||| ||||| ||||||||
Sbjct 56851 TCTTACCAGTCAGCGTCTTAACGAAGATCTGCAT 56884
Score = 91.5 bits (100), Expect = 1e-13
Identities = 137/192 (71%), Gaps = 2/192 (1%)
Strand=Plus/Plus
Query 41672 TCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 41731
|| |||||||||||||| || || || || | | || || || ||||| ||||| ||
Sbjct 56922 TCTTTCTGAATGTTATAATCAGACAGCGTTCTACCATCTTCCAGTTGCTTACCGGCAAAA 56981
Query 41732 ATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGAC 41791
|||| | ||||||||| | |||| | || |||||| ||| |||||| | |||
Sbjct 56982 ATCAATCTCTGTTGGTCTGGAGGAATACCTTCTTTGTCC-TGAATTTTTGACTTGACGTT 57040
Query 41792 GAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTAC 41850
| | | ||||||| || || ||||| | ||||| ||||| || || || || || ||
Sbjct 57041 GTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTATAGTTTTGCCAGTTAGAGTTTTGAC 57100
Query 41851 GAAAATCTGCAT 41862
||||| |||||
Sbjct 57101 AAAAATTTGCAT 57112
Score = 84.2 bits (92), Expect = 2e-11
Identities = 136/193 (70%), Gaps = 2/193 (1%)
Strand=Plus/Plus
Query 41671 CTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 41730
|||||| ||||| || || ||||| | || | | || || || || || ||||| ||
Sbjct 57149 CTCCTTTTGAATATTGTAATCGGATAACGTTCTGCCATCTTCCAGTTGTTTACCGGCAAA 57208
Query 41731 TATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGA 41790
|||| | ||||||||| | |||| | ||||| || ||| |||||| | |||
Sbjct 57209 AATCAATCTCTGTTGGTCTGGAGGAATACCTTCCTTATCT-TGAATTTTTGACTTGACGT 57267
Query 41791 CGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTA 41849
| | | |||||| || || ||||||| || || || ||||| ||||||||||| |
Sbjct 57268 TGTCGATCGTGTCGGAAGATTCGACCTCCAGAGTAATAGTCTTACCAGTCAGCGTCTTGA 57327
Query 41850 CGAAAATCTGCAT 41862
| || ||||||||
Sbjct 57328 CAAAGATCTGCAT 57340
Score = 84.2 bits (92), Expect = 2e-11
Identities = 139/196 (71%), Gaps = 10/196 (5%)
Strand=Plus/Plus
Query 41672 TCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 41731
|| |||||||||||||| || || || || | | || || || ||||| ||||| ||
Sbjct 57378 TCTTTCTGAATGTTATAATCAGACAGTGTTCTACCATCTTCCAGTTGCTTACCGGCAAAA 57437
Query 41732 ATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTG-CTTCAACGA 41790
|||| | ||||||||| | |||| | || |||||| ||| |||||| ||| ||
Sbjct 57438 ATCAACCTCTGTTGGTCTGGAGGAATACCTTCTTTGTCC-TGAATTTTTGACTT----GA 57492
Query 41791 CGACA-CA---GTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCT 41846
|| | || || || || || || |||| ||||| |||||||| |||| ||||
Sbjct 57493 CGTTATCAATGGTATCAGAAGATTCGACTTCCAATGTTATGGTTTTACCGGTCAAAGTCT 57552
Query 41847 TTACGAAAATCTGCAT 41862
| || ||||| |||||
Sbjct 57553 TGACAAAAATTTGCAT 57568
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462303901760400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |