Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079175.1_202017-03- 21] 17 sequences; 11,929,789 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq14 118 2e-21 seq10 87.8 4e-12 >seq14 Length=769517 Score = 118 bits (130), Expect = 2e-21 Identities = 154/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 319818 ATCGTGTTCCACGTAAGCAGTTTTCAAAACATCCGCAGAGGGGAACCCTTCAAGCTGGCC 319877 |||||||||||| ||| | || | |||| || |||||| || || | |||||| Sbjct 584126 ATCGTGTTCCACATAAACGGTGCGACACTCATCTTGAGTGGGGAAGCCATCGACCTGGCC 584067 Query 319878 GTTCACAATAGCGCGCATCAGGGTTGATTTACCCGCCCCGTTTGGCCCACACAGACCGTA 319937 || |||||| ||||| || || ||||| || || || ||||| ||||| ||||| || Sbjct 584066 ATTAGCAATAGATCGCATTAGAGTAGATTTTCCAGCACCATTTGGGCCACATAGACCATA 584007 Query 319938 GCGGTTTCCGCGTTTCAGGTTGAACCGCGTGTTGTTCAGAAGAATTTTTCCACCATATGC 319997 | | || || |||| | || | || ||||| || |||||||| |||||||||| Sbjct 584006 TCTTCTACCTCGCTTCAACCTCAATTGAGTCTTGTTTAGCAGAATTTTGGCACCATATGC 583947 Query 319998 CAGAGAAAATTCACAATCACACAGATCCTCACC 320030 || ||||||||||| | ||| | ||| ||||| Sbjct 583946 CAAGGAAAATTCACAGTTACATAAATCTTCACC 583914 >seq10 Length=750185 Score = 87.8 bits (96), Expect = 4e-12 Identities = 180/260 (69%), Gaps = 6/260 (2%) Strand=Plus/Plus Query 230381 AACAAATCATTACAGAAGCAGTTGAAAACGAA-AAGGAGTTCATTTGTGACGCTATTCCA 230439 || |||| | || || || || |||| |||| || || | | ||| ||||| | ||| Sbjct 398172 AAAAAATTGTCACCGAGGCTGTGGAAATCGAACAAAGA-TACTTTTTGGACGCCTTGCCA 398230 Query 230440 TGTCGCCTTATT-GGCATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAGCCGA 230498 || ||||| | || ||||||||||| || ||| || || | || ||||| || || Sbjct 398231 -GTTGCCTTGCTAGGTATGAACGCTGACCTAATGAACCAATATGTTGAGTTCGTTGCTGA 398289 Query 230499 CCGCATTTTTGTTGCACTTGGTTACGAGAAAGTGTACAA-CTCTAAGAACCCCTTTGCAT 230557 | | |||| ||||| | ||| || |||| ||||| || || |||||||| | | Sbjct 398290 CAGACTTTTGGTTGCTTTCGGTAACAAGAAGTACTACAAGGTCGAA-AACCCCTTCGACT 398348 Query 230558 TTATGGAGCTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACT 230617 ||||||| ||| || | || |||||||||||||| |||||| | || ||| | Sbjct 398349 TTATGGAAAACATCTCCTTGGCTGGTAAGACCAACTTCTTTGAAAAGAGAGTTTCTGATT 398408 Query 230618 ATCAGAGGCCTGGTGTGATG 230637 | || | | ||||||| ||| Sbjct 398409 ACCAAAAGGCTGGTGTTATG 398428 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057823769592710