Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079175.1_202017-03-
21] 17 sequences; 11,929,789 total letters
Query= NC_000852.5
Length=330611
Score E
Sequences producing significant alignments: (Bits) Value
seq14 118 2e-21
seq10 87.8 4e-12
>seq14
Length=769517
Score = 118 bits (130), Expect = 2e-21
Identities = 154/213 (72%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 319818 ATCGTGTTCCACGTAAGCAGTTTTCAAAACATCCGCAGAGGGGAACCCTTCAAGCTGGCC 319877
|||||||||||| ||| | || | |||| || |||||| || || | ||||||
Sbjct 584126 ATCGTGTTCCACATAAACGGTGCGACACTCATCTTGAGTGGGGAAGCCATCGACCTGGCC 584067
Query 319878 GTTCACAATAGCGCGCATCAGGGTTGATTTACCCGCCCCGTTTGGCCCACACAGACCGTA 319937
|| |||||| ||||| || || ||||| || || || ||||| ||||| ||||| ||
Sbjct 584066 ATTAGCAATAGATCGCATTAGAGTAGATTTTCCAGCACCATTTGGGCCACATAGACCATA 584007
Query 319938 GCGGTTTCCGCGTTTCAGGTTGAACCGCGTGTTGTTCAGAAGAATTTTTCCACCATATGC 319997
| | || || |||| | || | || ||||| || |||||||| ||||||||||
Sbjct 584006 TCTTCTACCTCGCTTCAACCTCAATTGAGTCTTGTTTAGCAGAATTTTGGCACCATATGC 583947
Query 319998 CAGAGAAAATTCACAATCACACAGATCCTCACC 320030
|| ||||||||||| | ||| | ||| |||||
Sbjct 583946 CAAGGAAAATTCACAGTTACATAAATCTTCACC 583914
>seq10
Length=750185
Score = 87.8 bits (96), Expect = 4e-12
Identities = 180/260 (69%), Gaps = 6/260 (2%)
Strand=Plus/Plus
Query 230381 AACAAATCATTACAGAAGCAGTTGAAAACGAA-AAGGAGTTCATTTGTGACGCTATTCCA 230439
|| |||| | || || || || |||| |||| || || | | ||| ||||| | |||
Sbjct 398172 AAAAAATTGTCACCGAGGCTGTGGAAATCGAACAAAGA-TACTTTTTGGACGCCTTGCCA 398230
Query 230440 TGTCGCCTTATT-GGCATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAGCCGA 230498
|| ||||| | || ||||||||||| || ||| || || | || ||||| || ||
Sbjct 398231 -GTTGCCTTGCTAGGTATGAACGCTGACCTAATGAACCAATATGTTGAGTTCGTTGCTGA 398289
Query 230499 CCGCATTTTTGTTGCACTTGGTTACGAGAAAGTGTACAA-CTCTAAGAACCCCTTTGCAT 230557
| | |||| ||||| | ||| || |||| ||||| || || |||||||| | |
Sbjct 398290 CAGACTTTTGGTTGCTTTCGGTAACAAGAAGTACTACAAGGTCGAA-AACCCCTTCGACT 398348
Query 230558 TTATGGAGCTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACT 230617
||||||| ||| || | || |||||||||||||| |||||| | || ||| |
Sbjct 398349 TTATGGAAAACATCTCCTTGGCTGGTAAGACCAACTTCTTTGAAAAGAGAGTTTCTGATT 398408
Query 230618 ATCAGAGGCCTGGTGTGATG 230637
| || | | ||||||| |||
Sbjct 398409 ACCAAAAGGCTGGTGTTATG 398428
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1057823769592710
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |