Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079175.1_202017-03- 21] 17 sequences; 11,929,789 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq15 120 2e-22 >seq15 Length=1052871 Score = 120 bits (132), Expect = 2e-22 Identities = 412/641 (64%), Gaps = 31/641 (5%) Strand=Plus/Plus Query 101542 CATATGCATTTTAATTATAGGGTGTGGGTTATAGTTTTCTAATATAATGTCATCTGCTTT 101601 ||| | ||||| |||| | ||||| || || || | ||| | | | ||| || || Sbjct 438585 CATTTTCATTTGAATTCTTGGGTGAGGATTGTAATCTTCAATTTCGAAGTCTTCCAACTT 438644 Query 101602 AAAGTCATCAATGCATGAAACATTTCTAGCAAATCTA-AGTGTTGGAAACGGTCTAGGAG 101660 || ||||||||| | | | || | ||||| ||| |||| || ||||| ||| Sbjct 438645 GAAATCATCAATGTCTTTTATGTCCCTT-CTAATCTTTAGTTTTGGGAATGGTCTTGGAT 438703 Query 101661 TTCGCGTCAACTGCATTTTAAGAGCATCAATGTGATCTACATAGATGTGAGCATCTCCTA 101720 || || | || ||| | || |||||||| || ||| | || ||||| |||| Sbjct 438704 CTCTGGTGATTTGTTCTTTCAAGGCTTCAATGTGGTCCTTATAAACATGTGCATCCCCTA 438763 Query 101721 TAGTATGGATAAACTCTCCAGGCACTAGATTAGTGACATGAGCAATCATGCAAGTTAAAA 101780 |||||| |||||||| || ||| | | | || | ||||||||| | ||| || | Sbjct 438764 GAGTATGAATAAACTCACCTGGCTCCATGTCGACAACTTTAGCAATCATTCTAGTCAACA 438823 Query 101781 GAGAATAGCTAGCAATGTTAAATGGCACTCCTAACCCCATATCAGCTGATCTTTGATACA 101840 ||| ||| ||||| |||||||| || || || ||||| ||| || | ||| || | Sbjct 438824 GAGCATATGATGCAATATTAAATGGTACGCCCAATCCCATGTCACAAGAACGTTGGTATA 438883 Query 101841 GTTGACAGGAAAG------CTTTCCA------------TC---------ACAGACATAAA 101873 ||| || || ||| ||| || || |||||||| Sbjct 438884 ACAAACATGATAGGCGGGGCTTACCAGATCCGTCTCCTTCTTTGGGGAAACTGACATAAA 438943 Query 101874 ATTGACTTAATACATGACAAGGCGGCAACACCATTTTAGGAATGTCTGAAACATTCCAAG 101933 |||| || | || || || ||||| |||| || || || | |||||||| Sbjct 438944 ATTGTGAAAAAATGTGGCATGGTGGCAAAGCCATCTTGTCAAAATCAGCTGGATTCCAAG 439003 Query 101934 CACACATTAACATCCTTCTATCTGTAGGGTTTGTTTTTATAGTATCAATCAACTGTTTTA 101993 ||| ||| | || |||||||| ||| ||||| |||| ||| ||| | ||| || | Sbjct 439004 CACTCATAATAATTCTTCTATCATAAGGATTTGTCTTTAGTTTATGAATGACCTGCTTCA 439063 Query 101994 ATTGGTCAACTCCTTCTCCTTTATAATCGCGCCCAACACCT-TTATATTCTGCTCCGAAA 102052 |||| |||| || | ||| ||| ||| | ||| | || |||| || |||||| Sbjct 439064 ATTGATCAATACCCTGTCCAGCATAGTCG-TCATCACAGGTCTTGTATTTAGCACCGAAA 439122 Query 102053 TGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTTCATCTCTGTCATAAAAACCA 102112 |||||||| || |||||||| || || || | ||| || | | ||| || || || Sbjct 439123 TGCCTCCATTGGAATCCATAAACGGGCCCTAAATCCCCCACCTTTCTATCTGTGAACCCC 439182 Query 102113 AGTTTATCTAAAAATGATCTAGATCCATTCGCATCCCAAAT 102153 | ||||||| | || | |||||||| | |||||||| Sbjct 439183 ATCTTATCTAGATATTCACGGGATCCATTACCGTCCCAAAT 439223 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361251125153267