Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079175.1_202017-03-
21] 17 sequences; 11,929,789 total letters
Query= NC_001973.1
Length=161046
Score E
Sequences producing significant alignments: (Bits) Value
seq10 93.3 4e-14
seq12 89.7 5e-13
>seq10
Length=750185
Score = 93.3 bits (102), Expect = 4e-14
Identities = 361/561 (64%), Gaps = 15/561 (3%)
Strand=Plus/Plus
Query 116657 GCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTGTCCAAGGACACGAGCGACTGG 116716
||||| || || |||||||||| || || | || |||| ||||| | ||||||
Sbjct 397589 GCCGAAGCCTCTTTCTGGACCGCTGAAGAAATTGATTTGTCTAAGGATATTCATGACTGG 397648
Query 116717 GAGCGCT---TGAACGACAACGAGCGCCATTTCAT--CAAGCACGTGCTGGCCTTTTTCG 116771
| | ||||||| |||||| | ||| || | || || || ||||||||||
Sbjct 397649 AACAACAGAATGAACGAAAACGAGAGATTTTTTATTTCTAGA--GTTCTTGCCTTTTTCG 397706
Query 116772 CCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGTTTCGCTCAGGAGGTGCAGG 116831
|||| ||||| || || || || || |||| || ||| || || || ||
Sbjct 397707 CCGCTTCTGACGGTATTGTTAATGAAAACTTGGTTGAAAACTTCTCTACCGAAGTTCAAA 397766
Query 116832 TGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATGGAGAACGTGCACTCGGAAA 116891
| | ||||| | | ||||| || || |||||| || || || | || || ||||
Sbjct 397767 TTCCAGAGGCAAAGAGTTTCTATGGTTTCCAGATCATGATTGAAAATATTCATTCTGAAA 397826
Query 116892 TGTATTCGACCCTCATCGACACGTACGT---GCGCTCTTCGGAG-GAGAAGCTCCGTTTG 116947
|| || | ||||| || ||| | | | || ||| | ||| || |||
Sbjct 397827 CTTACTCCTTATTGATCGATACCTACATAAAGGACCCTAAGGAAAGTGAAT-TC---TTG 397882
Query 116948 TTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCCGAGTGGGCGCTGCGCTGG 117007
|| || ||||| | || || || || ||||||||||||||||| || | |||
Sbjct 397883 TTCAATGCCATTCACACCATCCCAGAAATCGGTGAGAAGGCCGAGTGGGCTCTAAGATGG 397942
Query 117008 ATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGGCCTTCGCGGCCGTCGAGGGC 117067
|| | | || ||| || || || | || || ||||| || | |||| ||
Sbjct 397943 ATTCAAGACGCTGACGCCTTGTTTGGTGAAAGACTAGTCGCCTTTGCCTCTATCGAAGGT 398002
Query 117068 GTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAGAAACGCGGCCTCATGCCC 117127
|||||||| || || ||||| |||| || ||| | ||||| | || | ||||||
Sbjct 398003 GTCTTCTTCTCCGGTTCCTTCGCTTCCATTTTCTGGTTGAAGAAGAGAGGTATGATGCCC 398062
Query 117128 GGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGGTCTGCATTGCGACTTTGCC 117187
|| |||| ||| ||||| | || | ||| ||||| ||| |||| |||||||||
Sbjct 398063 GGTTTGACCTTCTCTAACGAATTGATTTGCAGAGACGAAGGTTTGCACACCGACTTTGCA 398122
Query 117188 TGTTTGCTGTTCAAGCATTTG 117208
|| || ||||| ||||||
Sbjct 398123 TGCTTATTGTTCGCCCATTTG 398143
>seq12
Length=1041178
Score = 89.7 bits (98), Expect = 5e-13
Identities = 149/213 (70%), Gaps = 2/213 (1%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
|||||||| || || || || | || || |||||||| || | || |||||| | |
Sbjct 74706 ATGCAAATTTTTGTCAAGACTTTGACCGGTAAAACCATAACATTGGAAGTCGAATCTTCT 74647
Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|| | | | | |||| ||||| |||||||| |||||||| || || || |||||||
Sbjct 74646 GATACCATTGATAACG-TCAAGTCAAAAATTCAGGACAAAGAAGGTATTCCTCCGGACCA 74588
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
|| | | || | || || || || ||||| || | | ||| | |||||||||
Sbjct 74587 ACAGAGGTTGATTTTTGCCGGTAAGCAACTGGAAGATGGTAGAACCTTGTCCGACTACAA 74528
Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTT 40901
|||||| |||||| |||| | ||| |||| ||
Sbjct 74527 CATCCAAAAGGAGTCCACTTTACATTTAGTATT 74495
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 515219090515920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |