Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079175.1_202017-03- 21] 17 sequences; 11,929,789 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq15 165 6e-36 >seq15 Length=1052871 Score = 165 bits (182), Expect = 6e-36 Identities = 371/559 (66%), Gaps = 29/559 (5%) Strand=Plus/Plus Query 96996 AAACTTTAGTGTTGGGAAAGGCCTGGGAGTTCGCGTAAGCTGCTCTGTGAGAGCATCAAT 97055 || ||||||| ||||||| || || ||| || || | || ||| | | || ||||| Sbjct 438675 AATCTTTAGTTTTGGGAATGGTCTTGGATCTCTGGTGATTTGTTCTTTCAAGGCTTCAAT 438734 Query 97056 GTGATTCACATAAATGTGAGCATCTCCTAAAGTGTGAATAAATTCTCCAGGAACTAAATC 97115 ||| | | ||||| || ||||| |||| ||| |||||||| || || || | | || Sbjct 438735 GTGGTCCTTATAAACATGTGCATCCCCTAGAGTATGAATAAACTCACCTGGCTCCATGTC 438794 Query 97116 AGTGACATGGGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCC 97175 || | || ||||| | ||| || |||| ||| ||||| ||||| || || || Sbjct 438795 GACAACTTTAGCAATCATTCTAGTCAACAGAGCATATGATGCAATATTAAATGGTACGCC 438854 Query 97176 TAGTCCCATATCAGCTGATCTTTGATATAACTGACAGGAAAG------CTTTCCA----- 97224 | |||||| ||| || | ||| |||||| ||| || || ||| ||| Sbjct 438855 CAATCCCATGTCACAAGAACGTTGGTATAACAAACATGATAGGCGGGGCTTACCAGATCC 438914 Query 97225 -------TC---------ACACACATAAAACTGACTCAATACATGACAGGGGGGCAACGC 97268 || || |||||||| || || | || || || ||||| || Sbjct 438915 GTCTCCTTCTTTGGGGAAACTGACATAAAATTGTGAAAAAATGTGGCATGGTGGCAAAGC 438974 Query 97269 CATTTTTGGAACATCTAAGACATTCCAAGCACACATCAACATTCTTCTATCGGTTGGGTT 97328 ||| || || ||| ||||||||||| ||| | ||||||||||| || || Sbjct 438975 CATCTTGTCAAAATCAGCTGGATTCCAAGCACTCATAATAATTCTTCTATCATAAGGATT 439034 Query 97329 TGTGTGTATGGTATTAATTATCTGCTTTAATTGATCAACGCCTTCTCCACCATAATTGTG 97388 ||| | || ||| ||| | |||||| |||||||||| || | |||| |||| | || Sbjct 439035 TGTCTTTAGTTTATGAATGACCTGCTTCAATTGATCAATACCCTGTCCAGCATAGTCGTC 439094 Query 97389 CTTA-AGACCTTGATATTCTGCTCCAAAATGCCTCCATTGGAATCCATAAACAGGTCCAA 97447 | | || |||| |||| || || |||||||||||||||||||||||||| || || | Sbjct 439095 ATCACAGGTCTTG-TATTTAGCACCGAAATGCCTCCATTGGAATCCATAAACGGGCCCTA 439153 Query 97448 GGTCTCCTTCTTCTCTATCACAGAAACCAAGCTTATCTAAATAGGACCTAGATCCATTTG 97507 || || | | |||||| ||| || | |||||||| ||| | |||||||| Sbjct 439154 AATCCCCCACCTTTCTATCTGTGAACCCCATCTTATCTAGATATTCACGGGATCCATTAC 439213 Query 97508 CATCCCAAATGTGCACACC 97526 | |||||||| | ||||| Sbjct 439214 CGTCCCAAATCTTAACACC 439232 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346783928150690