Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079175.1_202017-03-
21] 17 sequences; 11,929,789 total letters
Query= NC_003083.1
Length=118584
Score E
Sequences producing significant alignments: (Bits) Value
seq12 105 5e-18
seq9 100 2e-16
>seq12
Length=1041178
Score = 105 bits (116), Expect = 5e-18
Identities = 162/229 (71%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 18099 CCTCCCCGTAGTCTAAGTACCA--TGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGG 18156
|| || | |||||| | ||| | ||| ||||| || || ||||| |||||||||||||
Sbjct 74480 CCACCTCTTAGTCTTAATACTAAATGTAAAGTG--GACTCCTTTTGGATGTTGTAGTCGG 74537
Query 18157 CCATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGG 18216
|| ||| ||| |||||||| ||| || || ||| | || | || ||||| ||| |
Sbjct 74538 ACAAGGTTCTACCATCTTCCAGTTGCTTACCGGCAAAAATCAACCTCTGTTGGTCCGGAG 74597
Query 18217 GCACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGG 18276
| | ||||| || || ||||| | |||||| | ||| || ||| | |||
Sbjct 74598 GAATACCTTCTTTGTCCTGAATTTTTGACTTGACGTTATCAATGGTATCAGAAGATTCGA 74657
Query 18277 TTTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325
||| | || ||| |||| |||||||| || || ||||||||||||||
Sbjct 74658 CTTCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACAAAAATTTGCAT 74706
Score = 98.7 bits (108), Expect = 8e-16
Identities = 153/215 (71%), Gaps = 3/215 (1%)
Strand=Plus/Plus
Query 18112 TAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAAT 18171
|||| |||| ||| || || ||||| ||||||||||||||||||| | || | | ||
Sbjct 73810 TAAG-ACCAGGTGGAGAGTAGATTCCTTTTGAATGTTGTAGTCGGATAACGTCCTGCCAT 73868
Query 18172 CTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTAT 18231
|||||| ||| || || ||| | || | ||| ||||| ||| || | ||||||||||
Sbjct 73869 CTTCCAGTTGCTTACCGGCAAAAATCAATCTCTGTTGGTCCGGAGGAATACCTTCCTTAT 73928
Query 18232 CGGCAAT-TTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATG 18290
| ||| ||| | ||| || | ||| |||||| | || || | ||| |||
Sbjct 73929 CCTGAATCTTGCT-CTTCACGTTATCAATAGTGTCGGACGATTCAACCTCGAGGGTTATG 73987
Query 18291 CTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325
| || || |||| ||| || ||||||||||||||
Sbjct 73988 GTCTTACCCGTCAGTGTCTTAACAAAAATTTGCAT 74022
Score = 95.1 bits (104), Expect = 9e-15
Identities = 148/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 18117 ACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCC 18176
|||| ||| | || ||||| ||||| ||||||||||| | || ||| | | |||||||
Sbjct 481481 ACCAAGTGCAAAGTGGATTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTGCCATCTTCC 481422
Query 18177 AATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCA 18236
||||| || || ||| |||| | ||||||||| || || | |||||||| ||
Sbjct 481421 AATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTTGTCTTGG 481362
Query 18237 ATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTG 18296
|| | |||||| | ||| ||||||| | || ||| | ||| || | ||
Sbjct 481361 ATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCTAGGGTAATAGTCTTA 481302
Query 18297 CCGGTCAATGTTTTTACAAAAATTTGCATTTT 18328
||||| || || || || ||||||||||| ||
Sbjct 481301 CCGGTTAAAGTCTTGACGAAAATTTGCATCTT 481270
>seq9
Length=439147
Score = 100 bits (110), Expect = 2e-16
Identities = 141/197 (72%), Gaps = 2/197 (1%)
Strand=Plus/Minus
Query 18121 TGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCCAATT 18180
||| ||||| ||||||||||||||||| ||||| | || ||| ||| ||||||||||
Sbjct 64670 TGTAAAGTG--GATTCTTTTTGAATGTTATAGTCAGACAAGGTTCTACCGTCTTCCAATT 64613
Query 18181 GTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCAATTT 18240
| || || ||| |||| | ||||||||| || || | |||||||| || ||| |
Sbjct 64612 GCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTTGTCTTGAATCT 64553
Query 18241 GTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTGCCGG 18300
| |||||| | ||| ||||||| | || ||| | |||||| | || || |
Sbjct 64552 TTGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGATGGTCTTACCAG 64493
Query 18301 TCAATGTTTTTACAAAA 18317
|||| || || ||||||
Sbjct 64492 TCAAAGTCTTGACAAAA 64476
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 379343921404665
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |