Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079175.1_202017-03-
21] 17 sequences; 11,929,789 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq15 154 3e-32
seq10 123 5e-23
seq5 107 4e-18
>seq15
Length=1052871
Score = 154 bits (170), Expect = 3e-32
Identities = 211/296 (71%), Gaps = 18/296 (6%)
Strand=Plus/Minus
Query 35333 ATCTGGAACGCTAATGGGTCGCGGGAATTTTTGGACAGTAGAGGGTTATACGATAGAGCA 35392
|| ||| ||| |||||| || || |||| | | || | | ||||| ||||||
Sbjct 439223 ATTTGGGACGGTAATGGATCCCGTGAATATCTAGATAAGATGGGGTTCACAGATAGAAAG 439164
Query 35393 GAGGGAGATTTGGGACCCGTATACGGATTCCAATGGCGTCATTTTGGTGCTGAATATGAT 35452
| ||| ||||| || ||||| || |||||||||||| | ||||| |||||| |||| |
Sbjct 439163 GTGGGGGATTTAGGGCCCGTTTATGGATTCCAATGGAGGCATTTCGGTGCTAAATACAAG 439104
Query 35453 ACCTGTTCTTCCGATTATACTGGAAAGGGTATTGATCAATT------GGCCA---ATATA 35503
|||||| | ||| ||| ||||| |||||||||||||||| || || ||| |
Sbjct 439103 ACCTGTGATGACGACTATGCTGGACAGGGTATTGATCAATTGAAGCAGGTCATTCATAAA 439044
Query 35504 CTAAAGACCCTGAGAGAAAATCCAGATGATAGAAGGATGATTATGACGGCATGGAATCCT 35563
|||||||| |||||| |||||||||| || ||||||| || ||||||||
Sbjct 439043 CTAAAGAC---------AAATCCTTATGATAGAAGAATTATTATGAGTGCTTGGAATCCA 438993
Query 35564 ATGGATCTTCACCTTATGGCTCTTCCTCCATGCCACATGACTGCTCAATTTTATGT 35619
||| || || |||||| | || ||||||||||| | | |||||||||||
Sbjct 438992 GCTGATTTTGACAAGATGGCTTTGCCACCATGCCACATTTTTTCACAATTTTATGT 438937
>seq10
Length=750185
Score = 123 bits (136), Expect = 5e-23
Identities = 360/547 (66%), Gaps = 22/547 (4%)
Strand=Plus/Plus
Query 101820 TCTTGTTTAACGC--TGCACAACACTTCCCCGCCATCAAGAAGAAGGAGCAGTGGGCTAT 101877
||||||| || || | |||| || |||| | ||| |||||| |||||||| |
Sbjct 397878 TCTTGTTCAATGCCATTCACACCA--TCCCAGAAATCGGTGAGAAGGCCGAGTGGGCTCT 397935
Query 101878 TAATTGGATGCAAAGCAATAACGATTTG---GCGGAACTAATTGTTGCCTTTGCTGCAGT 101934
| ||||| ||| | | ||| ||| | ||| | | || |||||||| | |
Sbjct 397936 AAGATGGATTCAAGACGCTGACGCCTTGTTTGGTGAAAGACTAGTCGCCTTTGCCTCTAT 397995
Query 101935 TGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGGATCAAGAACAGGGGTAT 101994
||||| ||||||| ||| | ||||| |||||||||||| | ||||| || |||||
Sbjct 397996 CGAAGGTGTCTTCTTCTCCGGTTCCTTCGCTTCCATTTTCTGGTTGAAGAAGAGAGGTAT 398055
Query 101995 TTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGACGAAGGTCTTCATCGCGA 102054
|||| ||| | |||| ||| || || || |||| || ||||||||| | || |||
Sbjct 398056 GATGCCCGGTTTGACCTTCTCTAACGAATTGATTTGCAGAGACGAAGGTTTGCACACCGA 398115
Query 102055 CTTTGCATGCATGCTGTTGAAAAAGGGTTTTGTTGATACCCCATCAAGAGAAAG-GATTC 102113
|||||||||| | |||| | |||| || | | | ||| || |||
Sbjct 398116 CTTTGCATGCTTATTGTTCGCCCA----TTTGAAGA---ACAAACCAGACCCAGCCATTG 398168
Query 102114 TTG---AAATTGTCACTGAAGCCGTCCGAATTGAACAAGAATTTCTCACAGTTTCCCTGC 102170
||| |||||||||| || || || ||| |||||| || | | || |||
Sbjct 398169 TTGAAAAAATTGTCACCGAGGCTGTGGAAATCGAACAAAGATACTTTTTGGACGCCTTGC 398228
Query 102171 CTGTTAAATTAGTGGGAATGAACTGCAAGTTGATGAGCCAGTACATTGAATTTGTGGCAG 102230
| ||| || | || |||||| | | |||| ||| || |||| || || || |
Sbjct 398229 CAGTTGCCTTGCTAGGTATGAACGCTGACCTAATGAACCAATATGTTGAGTTCGTTGCTG 398288
Query 102231 ATAAACTATTGGTTGAAATGGG--ACTAGAAAAGCACTATAATGTTACCAACCCCTTCCC 102288
| | ||| ||||||| | || || || ||| |||| || || |||||||||
Sbjct 398289 ACAGACTTTTGGTTGCTTTCGGTAACAAG--AAGTACTACAAGGTCGAAAACCCCTTCGA 398346
Query 102289 ATTCATGGACAATATTTCCCTCGAGAATAAGACCAACTTTTTTGAAAAGAGAGTCGCCGA 102348
|| ||||| || || ||| | | |||||||||||| |||||||||||||| | ||
Sbjct 398347 CTTTATGGAAAACATCTCCTTGGCTGGTAAGACCAACTTCTTTGAAAAGAGAGTTTCTGA 398406
Query 102349 GTATCAA 102355
|| |||
Sbjct 398407 TTACCAA 398413
>seq5
Length=1007496
Score = 107 bits (118), Expect = 4e-18
Identities = 113/149 (76%), Gaps = 0/149 (0%)
Strand=Plus/Minus
Query 94189 GAAGCCAAATTGCACACTGCAGTTTCCTCCGAATCACTGTACTGGACAATTTCAGTGCAC 94248
|||||||| || || || |||||||| |||| | | ||||| ||||||||| |||
Sbjct 297059 GAAGCCAAGTTACAAACAGCAGTTTCGTCCGGAGCTGAGTACTCAACAATTTCACAGCAT 297000
Query 94249 AAATTTGAAGACTTGATGATGCCGACATTTTCTTGGTTAGACTTTCTATTGATGGTATCC 94308
|| || || |||||||| | || | |||| ||||||||||||||| ||| | ||||
Sbjct 296999 AAGTTCGATGACTTGATAACACCCAAGTTTTTTTGGTTAGACTTTCTGTTGCAAGCATCC 296940
Query 94309 TTAAAGCACACATAAGGTGTTCCAGTTTC 94337
||| | |||| ||||||| ||||||||
Sbjct 296939 TTATAAACCACAAAAGGTGTACCAGTTTC 296911
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989583784456235
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |