Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079175.1_202017-03- 21] 17 sequences; 11,929,789 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq12 100 3e-16 >seq12 Length=1041178 Score = 100 bits (110), Expect = 3e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || |||| ||| | || ||||| || | ||||| ||||| |||||||||||||| | Sbjct 74024 CCACCTCTTAATCTCAGCACTAAATGCAAAGTAGATTCTTTCTGAATGTTATAATCAGAC 74083 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | || || |||||| || || ||||||||| | || || | ||| ||||| || || Sbjct 74084 AGCGTTCTACCGTCTTCCAGTTGCTTACCAGCAAAAATAAGTCTTTGTTGATCTGGTGGG 74143 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717 || || |||||||| ||| || ||| | | || | ||||||| | || ||| Sbjct 74144 ATACCCTCTTTGTCTTGGATCTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAACC 74203 Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 || | ||| | || || || || | ||||| || || ||||||||| Sbjct 74204 TCTAGGGTTATAGTTTTACCAGTTAGAGTTTTGACAAAAATTTGCATA 74251 Score = 100 bits (110), Expect = 3e-16 Identities = 161/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || |||| || | ||| |||||||| | |||||||| |||||||| || || ||| | Sbjct 74252 CCACCTCTCAATCTCAAGACTAAGTGGAGAGTAGACTCCTTTTGAATATTGTAGTCGGAC 74311 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | || || ||||| || || ||||| ||| | |||| | || || || ||||| Sbjct 74312 AAGGTTCTACCATCTTCCAGTTGCTTACCGGCAAAAATCAACCTCTGTTGGTCCGGAGGA 74371 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716 || ||||||||||| ||| |||||| || | | || | ||||||| | || || Sbjct 74372 ATACCTTCTTTGTC-CTGAATTTTTGACTTGACGTTGTCGATCGTGTCGGAAGATTCGAC 74430 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 ||| | ||| | ||||| || |||| ||| || || || || |||||| Sbjct 74431 CTCGAGGGTTATAGTCTTACCAGTCAGCGTCTTAACAAAGATCTGCATA 74479 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496063894586400