Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079175.1_202017-03- 21] 17 sequences; 11,929,789 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq10 159 3e-34 >seq10 Length=750185 Score = 159 bits (176), Expect = 3e-34 Identities = 548/843 (65%), Gaps = 21/843 (2%) Strand=Plus/Minus Query 13351 TTAGAAATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAAAAGTTAGTTTTA 13410 || || ||||| || ||||| || ||| |||||| |||||||| ||||| || ||| Sbjct 398433 TTGGACATAACACCAGCCTTTTGGTAATCAGAAACTCTCTTTTCAAAGAAGTTGGTCTTA 398374 Query 13411 CCTTCCAGTGATATATTTTCCATAAAATCGAATGGATTTGTTGACATA--AACACTTTAT 13468 || ||| || || ||||||||||| ||||| || ||| | ||| | | |||| | Sbjct 398373 CCAGCCAAGGAGATGTTTTCCATAAAGTCGAAGGGGTTT-TCGACCTTGTAGTACTTCTT 398315 Query 13469 CACAACCTAGTTCTAATAATAATCTATCAGCAATAAACTCAATATATTGAGACATTAAAT 13528 | || | | | || | ||| ||||||| ||||||| |||||| ||||| | Sbjct 398314 GTTA-CCGAAAGCAACCAAAAGTCTGTCAGCAACGAACTCAACATATTGGTTCATTAGGT 398256 Query 13529 CACAATTCATACCTATTAGTTTTACAGGAATTATATTAGTTAAAAAT---TCTTT-TTCT 13584 || |||||||||| | || || | | || |||| ||||| ||| Sbjct 398255 CAGCGTTCATACCTAGCAAGGCAACTGGCA----AGGCGTCCAAAAAGTATCTTTGTTCG 398200 Query 13585 ATAGACACAGCCTCGTTTATAATAATCTTAATAATGTCATTAGAAGGAGGATATTTTAGA 13644 || |||||||||| | | ||| | | || |||| | || | || | | Sbjct 398199 ATTTCCACAGCCTCGGTGACAATTTTTTCAACAATGGCTGGGTCTGGTTTGTTCTTCAAA 398140 Query 13645 TGTTTAAAAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCG 13704 || || | ||| || ||||| || || | || || ||||| | ||| | |||| Sbjct 398139 TGGGCGAACAATAAGCATGCAAAGTCGGTGTGCAAACCTTCGTCTCTGCAAATCAATTCG 398080 Query 13705 TTTGAAAATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAAT 13764 || || || || || || ||||||| |||| || || ||||| || || | |||||| Sbjct 398079 TTAGAGAAGGTCAAACCGGGCATCATACCTCTCTTCTTCAACCAGAAAATGGAAGCGAAG 398020 Query 13765 GATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAGTCGTTCTCCAAACGAT 13824 || ||||| ||||| | || || | | ||||| || | ||||| ||| |||||| | Sbjct 398019 GAACCGGAGAAGAAGACACCTTCGATAGAGGCAAAGGCGACTAGTCTTTCACCAAACAAG 397960 Query 13825 GCTTTTTTGT-TTGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCAT 13883 || | || |||| |||||| || |||||| || | || | || || Sbjct 397959 GCGTCAGCGTCTTGA-ATCCATCTTAGAGCCCACTCGGCCTTCTCACCGATTTCTGGGAT 397901 Query 13884 TGTTTCGATTGCATTGAATAAATGTTCCTTCTCTTTAG--TACTTGAAATGTATGTATCA 13941 || | || |||||||| || ||| | || |||| | ||| | |||| ||||| Sbjct 397900 GGTGTGAATGGCATTGAACAAGAATTCACTTTCCTTAGGGTCCTTTA--TGTAGGTATCG 397843 Query 13942 ATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCTATAGCTATCTGAAAACCATAAAAA 14001 || | |||| || ||||||| || || ||||| || ||||| |||||||| ||| Sbjct 397842 ATCAATAAGGAGTAAGTTTCAGAATGAATATTTTCAATCATGATCTGGAAACCATAGAAA 397783 Query 14002 CATCTAGCTTCTGACCATTGTACCTCCGAGTAAAATCTTTCTGCCAAGTTTTCATTAACA 14061 | | || |||| ||| || || | | || |||| ||||||||||||||||| Sbjct 397782 CTCTTTGCCTCTGGAATTTGAACTTCGGTAGAGAAGTTTTCAACCAAGTTTTCATTAACA 397723 Query 14062 ATACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTG 14121 ||||| ||| ||| || ||||| || | | | |||||| || ||| | | | Sbjct 397722 ATACCGTCAGAAGCGGCGAAAAAGGCAAGAACTCTAGAAATAAAAAATCTCTCGTTTTCG 397663 Query 14122 TTGAGT---TTTTTCCAATCGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAA 14178 || | | || ||||| || | ||||||||| | ||| | ||| ||| | ||||| Sbjct 397662 TTCATTCTGTTGTTCCAGTCATGAATATCCTTAGACAAATCAATTTCTTCAGCGGTCCAG 397603 Query 14179 AAA 14181 ||| Sbjct 397602 AAA 397600 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478588698299880