Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079175.1_202017-03-
21] 17 sequences; 11,929,789 total letters
Query= NC_004003.1
Length=149599
Score E
Sequences producing significant alignments: (Bits) Value
seq10 159 3e-34
>seq10
Length=750185
Score = 159 bits (176), Expect = 3e-34
Identities = 548/843 (65%), Gaps = 21/843 (2%)
Strand=Plus/Minus
Query 13351 TTAGAAATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAAAAGTTAGTTTTA 13410
|| || ||||| || ||||| || ||| |||||| |||||||| ||||| || |||
Sbjct 398433 TTGGACATAACACCAGCCTTTTGGTAATCAGAAACTCTCTTTTCAAAGAAGTTGGTCTTA 398374
Query 13411 CCTTCCAGTGATATATTTTCCATAAAATCGAATGGATTTGTTGACATA--AACACTTTAT 13468
|| ||| || || ||||||||||| ||||| || ||| | ||| | | |||| |
Sbjct 398373 CCAGCCAAGGAGATGTTTTCCATAAAGTCGAAGGGGTTT-TCGACCTTGTAGTACTTCTT 398315
Query 13469 CACAACCTAGTTCTAATAATAATCTATCAGCAATAAACTCAATATATTGAGACATTAAAT 13528
| || | | | || | ||| ||||||| ||||||| |||||| ||||| |
Sbjct 398314 GTTA-CCGAAAGCAACCAAAAGTCTGTCAGCAACGAACTCAACATATTGGTTCATTAGGT 398256
Query 13529 CACAATTCATACCTATTAGTTTTACAGGAATTATATTAGTTAAAAAT---TCTTT-TTCT 13584
|| |||||||||| | || || | | || |||| ||||| |||
Sbjct 398255 CAGCGTTCATACCTAGCAAGGCAACTGGCA----AGGCGTCCAAAAAGTATCTTTGTTCG 398200
Query 13585 ATAGACACAGCCTCGTTTATAATAATCTTAATAATGTCATTAGAAGGAGGATATTTTAGA 13644
|| |||||||||| | | ||| | | || |||| | || | || | |
Sbjct 398199 ATTTCCACAGCCTCGGTGACAATTTTTTCAACAATGGCTGGGTCTGGTTTGTTCTTCAAA 398140
Query 13645 TGTTTAAAAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCG 13704
|| || | ||| || ||||| || || | || || ||||| | ||| | ||||
Sbjct 398139 TGGGCGAACAATAAGCATGCAAAGTCGGTGTGCAAACCTTCGTCTCTGCAAATCAATTCG 398080
Query 13705 TTTGAAAATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAAT 13764
|| || || || || || ||||||| |||| || || ||||| || || | ||||||
Sbjct 398079 TTAGAGAAGGTCAAACCGGGCATCATACCTCTCTTCTTCAACCAGAAAATGGAAGCGAAG 398020
Query 13765 GATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAGTCGTTCTCCAAACGAT 13824
|| ||||| ||||| | || || | | ||||| || | ||||| ||| |||||| |
Sbjct 398019 GAACCGGAGAAGAAGACACCTTCGATAGAGGCAAAGGCGACTAGTCTTTCACCAAACAAG 397960
Query 13825 GCTTTTTTGT-TTGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCAT 13883
|| | || |||| |||||| || |||||| || | || | || ||
Sbjct 397959 GCGTCAGCGTCTTGA-ATCCATCTTAGAGCCCACTCGGCCTTCTCACCGATTTCTGGGAT 397901
Query 13884 TGTTTCGATTGCATTGAATAAATGTTCCTTCTCTTTAG--TACTTGAAATGTATGTATCA 13941
|| | || |||||||| || ||| | || |||| | ||| | |||| |||||
Sbjct 397900 GGTGTGAATGGCATTGAACAAGAATTCACTTTCCTTAGGGTCCTTTA--TGTAGGTATCG 397843
Query 13942 ATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCTATAGCTATCTGAAAACCATAAAAA 14001
|| | |||| || ||||||| || || ||||| || ||||| |||||||| |||
Sbjct 397842 ATCAATAAGGAGTAAGTTTCAGAATGAATATTTTCAATCATGATCTGGAAACCATAGAAA 397783
Query 14002 CATCTAGCTTCTGACCATTGTACCTCCGAGTAAAATCTTTCTGCCAAGTTTTCATTAACA 14061
| | || |||| ||| || || | | || |||| |||||||||||||||||
Sbjct 397782 CTCTTTGCCTCTGGAATTTGAACTTCGGTAGAGAAGTTTTCAACCAAGTTTTCATTAACA 397723
Query 14062 ATACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTG 14121
||||| ||| ||| || ||||| || | | | |||||| || ||| | | |
Sbjct 397722 ATACCGTCAGAAGCGGCGAAAAAGGCAAGAACTCTAGAAATAAAAAATCTCTCGTTTTCG 397663
Query 14122 TTGAGT---TTTTTCCAATCGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAA 14178
|| | | || ||||| || | ||||||||| | ||| | ||| ||| | |||||
Sbjct 397662 TTCATTCTGTTGTTCCAGTCATGAATATCCTTAGACAAATCAATTTCTTCAGCGGTCCAG 397603
Query 14179 AAA 14181
|||
Sbjct 397602 AAA 397600
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478588698299880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |