Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079175.1_202017-03-
21] 17 sequences; 11,929,789 total letters
Query= NC_004062.1
Length=119217
Score E
Sequences producing significant alignments: (Bits) Value
seq12 122 7e-23
>seq12
Length=1041178
Score = 122 bits (134), Expect = 7e-23
Identities = 169/233 (73%), Gaps = 8/233 (3%)
Strand=Plus/Plus
Query 42892 AGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGT 42951
|||||||| || ||||| | |||| ||||||||| | ||||| |||||||| || |
Sbjct 74489 AGTCTTAATACTAAATGTAAAGTGGACTCCTTTTGGATGTTGTAGTCGGACAAGGTTCTA 74548
Query 42952 TCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCT 43011
| || |||| ||| || |||||||||||||| | |||||| || | || | |||||||
Sbjct 74549 CCATCTTCCAGTTGCTTACCGGCAAAAATCAACCTCTGTTGGTCCGGAGGAATACCTTCT 74608
Query 43012 TTTTCGCTGATCAACTCT---TTGACTCTGCCAACTGTGTCGCCAGCCTCGACGTCTACC 43068
|| || |||| | | | ||||| | ||| || || || ||||| || |
Sbjct 74609 TTGTC-CTGA--ATTTTTGACTTGACGTTATCAATGGTATCAGAAGATTCGACTTCCAAT 74665
Query 43069 GTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT--TTTCTTAATT 43119
||||| ||||| ||||| | ||| || |||||||||||||| | ||||| ||
Sbjct 74666 GTTATGGTTTTACCGGTCAAAGTCTTGACAAAAATTTGCATAATGTCTTAGTT 74718
Score = 114 bits (126), Expect = 1e-20
Identities = 157/217 (72%), Gaps = 2/217 (1%)
Strand=Plus/Plus
Query 42894 TCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGTTC 42953
||| | ||| ||||| | ||| || || || | || ||||| |||| || | |
Sbjct 74035 TCTCAGCACTAAATGCAAAGTAGATTCTTTCTGAATGTTATAATCAGACAGCGTTCTACC 74094
Query 42954 GTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCTTT 43013
||| |||| ||| || || |||||||| | || |||||||| | || | ||| |||||
Sbjct 74095 GTCTTCCAGTTGCTTACCAGCAAAAATAAGTCTTTGTTGATCTGGTGGGATACCCTCTTT 74154
Query 43014 TTCGCTGATCA-ACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACGTCTACCGTTA 43072
|| |||| ||| |||||| || ||| |||||| || || || |||| ||||
Sbjct 74155 GTCTTGGATCTTACT-TTTGACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTA 74213
Query 43073 TAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109
||||||| || ||||||||||| ||||||||||||||
Sbjct 74214 TAGTTTTACCAGTTAGAGTTTTGACAAAAATTTGCAT 74250
Score = 109 bits (120), Expect = 4e-19
Identities = 164/230 (71%), Gaps = 6/230 (3%)
Strand=Plus/Plus
Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942
|| || | || ||| || || || |||| ||| ||||||||| | |||||| ||||||
Sbjct 74252 CCACCTCTCAATCTCAAGACTAAGTGGAGAGTAGACTCCTTTTGAATATTGTAGTCGGAC 74311
Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002
|| || | | || |||| ||| || |||||||||||||| | |||||| || | ||
Sbjct 74312 AAGGTTCTACCATCTTCCAGTTGCTTACCGGCAAAAATCAACCTCTGTTGGTCCGGAGGA 74371
Query 43003 ACACCTTCTTTTTCGCTGATCAACTCT---TTGACTCTGCCAACTGTGTCGCCAGCCTCG 43059
| ||||||||| || |||| | | | ||||| || | | |||||| || |||
Sbjct 74372 ATACCTTCTTTGTC-CTGA--ATTTTTGACTTGACGTTGTCGATCGTGTCGGAAGATTCG 74428
Query 43060 ACGTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109
|| || | |||||||| || || || || || || ||||| || |||||
Sbjct 74429 ACCTCGAGGGTTATAGTCTTACCAGTCAGCGTCTTAACAAAGATCTGCAT 74478
Score = 104 bits (114), Expect = 2e-17
Identities = 161/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942
|| || | || ||| || ||||| || | |||| |||||||| | ||||| || |||
Sbjct 481499 CCACCTCTCAATCTCAAGACCAAGTGCAAAGTGGATTCCTTTTGGATGTTGTAGTCAGAC 481440
Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002
|| || | | || |||||||| || || ||||| ||||||| ||||| || | ||
Sbjct 481439 AAAGTTCTGCCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 481380
Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACG 43062
| |||||| || || |||| ||||| || ||| ||||| || || ||
Sbjct 481379 ATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACT 481320
Query 43063 TCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCATTTT 43112
|||| || ||||| || ||||||| ||| || || ||||||||||| ||
Sbjct 481319 TCTAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATCTT 481270
Score = 93.3 bits (102), Expect = 3e-14
Identities = 154/217 (71%), Gaps = 4/217 (2%)
Strand=Plus/Plus
Query 42895 CTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGTTCG 42954
||||| |||| |||| ||| |||||||| | ||||| ||||| || || | |
Sbjct 73808 CTTAAGACCAGGTGGAGAGTAGATTCCTTTTGAATGTTGTAGTCGGATAACGTCCTGCCA 73867
Query 42955 TCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTT 43014
|| |||| ||| || |||||||||||||||| |||||| || | || | |||||| ||
Sbjct 73868 TCTTCCAGTTGCTTACCGGCAAAAATCAATCTCTGTTGGTCCGGAGGAATACCTTCCTTA 73927
Query 43015 TCGCTG-ATC-AACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACGTCTACCGTTA 43072
|| ||| ||| ||| || || | ||| |||||| | || || || | ||||
Sbjct 73928 TC-CTGAATCTTGCTC-TTCACGTTATCAATAGTGTCGGACGATTCAACCTCGAGGGTTA 73985
Query 43073 TAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109
| || || || || || || || ||||||||||||||
Sbjct 73986 TGGTCTTACCCGTCAGTGTCTTAACAAAAATTTGCAT 74022
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 381369520984986
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |