Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079175.1_202017-03- 21] 17 sequences; 11,929,789 total letters Query= NC_004778.3 Length=129593 Score E Sequences producing significant alignments: (Bits) Value seq12 116 3e-21 >seq12 Length=1041178 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 18815 CCTCCTCGCAACCTTAACACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCC 18874 || |||| || || | ||| | ||||| ||||| || || ||||| || ||||| | | Sbjct 74024 CCACCTCTTAATCTCAGCACTAAATGCAAAGTAGATTCTTTCTGAATGTTATAATCAGAC 74083 Query 18875 ATTGTTTTGGCGTCCTCCAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGC 18934 | ||| | |||| ||||| || ||||| ||| |||||||||| || ||||| || Sbjct 74084 AGCGTTCTACCGTCTTCCAGTTGCTTACCAGCAAAAATAAGTCTTTGTTGATCTGGTGGG 74143 Query 18935 ACGCCCTCTTTGTCGGCAATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTT 18994 | ||||||||||| || || ||| || | | | | ||| ||| || || Sbjct 74144 ATACCCTCTTTGTCTTGGATCTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAACC 74203 Query 18995 TCGACGGTAATGGTTTTACCTGTTAAAGTTTTGACAAAAATTTGCAT 19041 || | ||| || |||||||| |||| ||||||||||||||||||||| Sbjct 74204 TCTAGGGTTATAGTTTTACCAGTTAGAGTTTTGACAAAAATTTGCAT 74250 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 18815 CCTCCTCGCAACCTTAACACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCC 18874 || |||| ||| || || || | ||| | ||||||||||||||||||||||| || | | Sbjct 74252 CCACCTCTCAATCTCAAGACTAAGTGGAGAGTAGACTCCTTTTGAATATTGTAGTCGGAC 74311 Query 18875 ATTGTTTTGGCGTCCTCCAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGC 18934 | ||| | | || ||||| || ||||| ||| |||| | ||||| || ||| || Sbjct 74312 AAGGTTCTACCATCTTCCAGTTGCTTACCGGCAAAAATCAACCTCTGTTGGTCCGGAGGA 74371 Query 18935 ACGCCCTCTTTGTCGGCAATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTT 18994 | || |||||||| |||||| || || | | ||| || ||| || || Sbjct 74372 ATACCTTCTTTGTCCTGAATTTTTGACTTGACGTTGTCGATCGTGTCGGAAGATTCGACC 74431 Query 18995 TCGACGGTAATGGTTTTACCTGTTAAAGTTTTGACAAAAATTTGCAT 19041 |||| ||| || || ||||| || | || || ||||| || ||||| Sbjct 74432 TCGAGGGTTATAGTCTTACCAGTCAGCGTCTTAACAAAGATCTGCAT 74478 Score = 95.1 bits (104), Expect = 1e-14 Identities = 150/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 18827 CTTAACACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCCATTGTTTTGGCG 18886 ||||| || | || || || ||||||||||| || ||||| || | || ||| | | Sbjct 74492 CTTAATACTAAATGTAAAGTGGACTCCTTTTGGATGTTGTAGTCGGACAAGGTTCTACCA 74551 Query 18887 TCCTCCAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGCACGCCCTCTTTG 18946 || ||||| || ||||| ||| |||| | ||||| || ||| || | || |||||| Sbjct 74552 TCTTCCAGTTGCTTACCGGCAAAAATCAACCTCTGTTGGTCCGGAGGAATACCTTCTTTG 74611 Query 18947 TCGGCAATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTTTCGACGGTAATG 19006 || |||||| || || | | | ||||| || || ||| | || ||| Sbjct 74612 TCCTGAATTTTTGACTTGACGTTATCAATGGTATCAGAAGATTCGACTTCCAATGTTATG 74671 Query 19007 GTTTTACCTGTTAAAGTTTTGACAAAAATTTGCAT 19041 |||||||| || ||||| ||||||||||||||||| Sbjct 74672 GTTTTACCGGTCAAAGTCTTGACAAAAATTTGCAT 74706 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 18815 CCTCCTCGCAACCTTAACACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCC 18874 || |||| ||| || || |||| |||||| || || |||||||| || ||||| || | | Sbjct 481499 CCACCTCTCAATCTCAAGACCAAGTGCAAAGTGGATTCCTTTTGGATGTTGTAGTCAGAC 481440 Query 18875 ATTGTTTTGGCGTCCTCCAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGC 18934 | ||| || | || |||| || ||||| ||| | || | ||| || || || || Sbjct 481439 AAAGTTCTGCCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 481380 Query 18935 ACGCCCTCTTTGTCGGCAATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTT 18994 | || || ||||| || || || || | | | | ||| || || || | Sbjct 481379 ATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACT 481320 Query 18995 TCGACGGTAATGGTTTTACCTGTTAAAGTTTTGACAAAAATTTGCATTTT 19044 || | |||||| || ||||| |||||||| ||||| ||||||||||| || Sbjct 481319 TCTAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATCTT 481270 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414572714105698