Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079175.1_202017-03-
21] 17 sequences; 11,929,789 total letters
Query= NC_005038.1
Length=99657
Score E
Sequences producing significant alignments: (Bits) Value
seq12 102 5e-17
>seq12
Length=1041178
Score = 102 bits (112), Expect = 5e-17
Identities = 162/232 (70%), Gaps = 8/232 (3%)
Strand=Plus/Plus
Query 33142 ACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGA 33201
||| |||||||| | || ||| |||||||| || || ||||| || || || ||||||||
Sbjct 74023 ACCACCTCTTAATCTCAGCACTAAATGCAAAGTAGATTCTTTCTGAATGTTATAATCAGA 74082
Query 33202 CAAATTGAGTTG----GTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCG 33257
|| | ||| ||| |||| |||||| ||| ||| || | | ||| || || |
Sbjct 74083 CA----GCGTTCTACCGTCTTCCAGTTGCTTACCAGCAAAAATAAGTCTTTGTTGATCTG 74138
Query 33258 TGGGTATGCCTTCTTTTTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTT 33317
|| || || ||||| || ||| ||| || | | ||| |||||| | ||
Sbjct 74139 GTGGGATACCCTCTTTGTCTTGGATCTTACTTTTGACGTTGTCAATAGTGTCGGAAGATT 74198
Query 33318 GAACGTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369
||| || || ||||| ||||| || || |||||||| || |||||||||||
Sbjct 74199 CAACCTCTAGGGTTATAGTTTTACCAGTTAGAGTTTTGACAAAAATTTGCAT 74250
Score = 95.1 bits (104), Expect = 8e-15
Identities = 160/232 (69%), Gaps = 0/232 (0%)
Strand=Plus/Minus
Query 33141 CACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAG 33200
|||| ||||| || | ||| ||||| ||||| || || || ||||| || ||||| ||||
Sbjct 481501 CACCACCTCTCAATCTCAAGACCAAGTGCAAAGTGGATTCCTTTTGGATGTTGTAGTCAG 481442
Query 33201 ACAAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGG 33260
||||| | || ||||||||||| ||| ||| || || | ||| ||||| | |
Sbjct 481441 ACAAAGTTCTGCCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTG 481382
Query 33261 GTATGCCTTCTTTTTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAA 33320
| || ||||| || || ||| || || | | ||| ||||| | || ||
Sbjct 481381 GGATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAA 481322
Query 33321 CGTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCATGTT 33372
| || || || || || || || || | ||| || |||||||||||||| ||
Sbjct 481321 CTTCTAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATCTT 481270
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 318777533953266
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |