Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079175.1_202017-03-
21] 17 sequences; 11,929,789 total letters
Query= NC_005179.1
Length=134721
Score E
Sequences producing significant alignments: (Bits) Value
seq10 161 9e-35
>seq10
Length=750185
Score = 161 bits (178), Expect = 9e-35
Identities = 554/852 (65%), Gaps = 29/852 (3%)
Strand=Plus/Minus
Query 12842 TTTGACATAACAGACATTTTTTGATATTCGCTAACTCTTTTTTCAAAAAAGTTTGTTTTT 12901
|| ||||||||| ||||| || || |||||| |||||||| ||||| || ||
Sbjct 398433 TTGGACATAACACCAGCCTTTTGGTAATCAGAAACTCTCTTTTCAAAGAAGTTGGTCTTA 398374
Query 12902 CCTTCTAACGAAATATTTTCCATAAAATCGAAAGGATTTTTCGAACAA-TAGTATTTTTT 12960
|| | || || || ||||||||||| ||||| || |||| ||| | ||||| || ||
Sbjct 398373 CCAGCCAAGGAGATGTTTTCCATAAAGTCGAAGGGGTTTT-CGACCTTGTAGTACTTCTT 398315
Query 12961 ACACCCTAATTCTAGTAACAATCTGTCAGCAACAAACTCTATGTACTGTTTCATTAAATC 13020
|| || | | || | |||||||||||| ||||| | || || ||||||| ||
Sbjct 398314 GTTACCGAAAGCAACCAAAAGTCTGTCAGCAACGAACTCAACATATTGGTTCATTAGGTC 398255
Query 13021 ACAGTTCATTCCTATTAATTTTACAGGCATAGCTTCTGTTAAAAAGt---ttttttCTAT 13077
| |||||| |||| || || |||| || || ||||||| ||| ||| ||
Sbjct 398254 AGCGTTCATACCTAGCAAGGCAACTGGCAAGGCGTCC---AAAAAGTATCTTTGTTCGAT 398198
Query 13078 ATCAACTGCTTCGATAACTATGTCTCTTATTACGTTCTCTAATGGAGGATTTGAT----A 13133
|| || || ||| | || || | | | | || | || || |||| | |
Sbjct 398197 TTCCACAGCCTCGGTGACAATTTTT-TCA--ACAATGGCTGGGTCTGG-TTTGTTCTTCA 398142
Query 13134 GATGCTTAAACATCATACATGCAAAATCACAGTGCAATCCTTCATCTCTACTTATTAGCT 13193
||| |||| | |||||||| || |||||| ||||| ||||| | || | |
Sbjct 398141 AATGGGCGAACAATAAGCATGCAAAGTCGGTGTGCAAACCTTCGTCTCTGCAAATCAATT 398082
Query 13194 CGTTTGAAAATGTTAGACCCGGCATAAGCCCTCGTTTTTTAATCCAAAATATAGCAGCAA 13253
|||| || || || | ||| ||||| | |||| || || | ||| || || | ||| |
Sbjct 398081 CGTTAGAGAAGGTCAAACCGGGCATCATACCTCTCTTCTTCAACCAGAAAATGGAAGCGA 398022
Query 13254 ACGAACCCGaaaaaaaTATTCCTTCAACTGCTGCAAACGCTATCAACCTTTCACCATACG 13313
| ||||| || || || | ||||| | | ||||| || | | ||||||||| ||
Sbjct 398021 AGGAACCGGAGAAGAAGACACCTTCGATAGAGGCAAAGGCGACTAGTCTTTCACCAAACA 397962
Query 13314 TACTATTTTTACTCTCTA-TCCACTTTCTGGCCCAGTTTGCTTTTTGTTTAACGCAGTTC 13372
| | ||| | |||| || ||||| | || || | || | |||
Sbjct 397961 -AGGCGTCAGCGTCTTGAATCCATCTTAGAGCCCACTCGGCCTTCTC----ACCGATTTC 397907
Query 13373 ----ATATTTTCTATTGCGTTAAATAAATAAtttttttCCTTACTGTCTAAAATATAAGT 13428
|| | | || || || || || | | |||||||| ||| || || ||
Sbjct 397906 TGGGATGGTGTGAATGGCATTGAACAAGAATTCACTTTCCTTAGGGTCCTTTATGTAGGT 397847
Query 13429 ATCTATCAATAAGCTATACATTTCTGAATGAATATTTTCCATCGCTATTTGGAAACCATA 13488
||| ||||||||| || |||| |||||||||||||| ||| || |||||||||||
Sbjct 397846 ATCGATCAATAAGGAGTAAGTTTCAGAATGAATATTTTCAATCATGATCTGGAAACCATA 397787
Query 13489 AAAACATCTAGCCTCTGATACCTGAACTTCGGAGTAAAATCTTTCTGCTAAGTTTTCGTT 13548
|||| | ||||||| | |||||||||| | || |||| | |||||||| ||
Sbjct 397786 GAAACTCTTTGCCTCTGGAATTTGAACTTCGGTAGAGAAGTTTTCAACCAAGTTTTCATT 397727
Query 13549 AACTATCCCGTCACTAGCAGCaaaaaaaGCAAGTATGTGCTTAATAAAttttttttCGTT 13608
||| || |||||| ||| || ||||| ||||| | |||||| | | |||||
Sbjct 397726 AACAATACCGTCAGAAGCGGCGAAAAAGGCAAGAACTCTAGAAATAAAAAATCTCTCGTT 397667
Query 13609 TTCTGACA---ACTTTAACCAATCTGGAAAATCTTTTGATAAATCTACCTCCTCAACGGT 13665
||| || || ||| || ||| ||| || || ||||| | || ||| ||||
Sbjct 397666 TTCGTTCATTCTGTTGTTCCAGTCATGAATATCCTTAGACAAATCAATTTCTTCAGCGGT 397607
Query 13666 CCAAAAAGAAGC 13677
||| ||||| ||
Sbjct 397606 CCAGAAAGAGGC 397595
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 430982310705834
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |