Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079175.1_202017-03-
21] 17 sequences; 11,929,789 total letters
Query= NC_005309.1
Length=359853
Score E
Sequences producing significant alignments: (Bits) Value
seq12 194 4e-44
seq10 181 2e-40
seq9 141 2e-28
seq11 132 1e-25
>seq12
Length=1041178
Score = 194 bits (214), Expect = 4e-44
Identities = 181/230 (79%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
|| || ||||||| || || |||| ||| || ||||||||||||||||| ||||| |||
Sbjct 74021 ATACCACCTCTTAATCTCAGCACTAAATGCAAAGTAGATTCTTTCTGAATGTTATAATCA 74080
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
|| || |||||||||||||| ||||| || ||||||||||| || || |||||||| ||
Sbjct 74081 GACAGCGTTCTACCGTCTTCCAGTTGCTTACCAGCAAAAATAAGTCTTTGTTGATCTGGT 74140
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509
|| || || ||||| || || ||||| ||| || || || | || ||| || |||
Sbjct 74141 GGGATACCCTCTTTGTCTTGGATCTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCA 74200
Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
|||||||| || ||||| |||||||| || ||||| ||||| || |||||
Sbjct 74201 ACCTCTAGGGTTATAGTTTTACCAGTTAGAGTTTTGACAAAAATTTGCAT 74250
Score = 167 bits (184), Expect = 5e-36
Identities = 175/230 (76%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
|| || ||||| | || | |||| || | ||||| || || |||||||| |||||
Sbjct 74249 ATACCACCTCTCAATCTCAAGACTAAGTGGAGAGTAGACTCCTTTTGAATATTGTAGTCG 74308
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
|| | |||||||| ||||| ||||| || || |||||||| | ||||||||| || |||
Sbjct 74309 GACAAGGTTCTACCATCTTCCAGTTGCTTACCGGCAAAAATCAACCTCTGTTGGTCCGGA 74368
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509
|| || |||||||| |||||||| |||| || || || || | || ||| || |||
Sbjct 74369 GGAATACCTTCTTTGTCCTGAATTTTTGACTTGACGTTGTCGATCGTGTCGGAAGATTCG 74428
Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
||||| || || |||||||||||||| || || || ||||| ||||||||
Sbjct 74429 ACCTCGAGGGTTATAGTCTTACCAGTCAGCGTCTTAACAAAGATCTGCAT 74478
Score = 143 bits (158), Expect = 6e-29
Identities = 152/198 (77%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|||||||| || ||||| || ||||| |||| || || || ||||| ||||| || ||
Sbjct 73826 GTAGATTCCTTTTGAATGTTGTAGTCGGATAACGTCCTGCCATCTTCCAGTTGCTTACCG 73885
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCT-TT 104481
|||||||| | |||||||| || ||||| || ||||| |||||||||||| ||||| ||
Sbjct 73886 GCAAAAATCAATCTCTGTTGGTCCGGAGGAATACCTTCCTTATCCTGAATC-TTGCTCTT 73944
Query 104482 TACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541
|| || || | || ||| | ||| ||||| || || || |||||||| || |||||
Sbjct 73945 CACGTTATCAATAGTGTCGGACGATTCAACCTCGAGGGTTATGGTCTTACCCGTCAGTGT 74004
Query 104542 TTTTACAAATATCTGCAT 104559
|| ||||| || |||||
Sbjct 74005 CTTAACAAAAATTTGCAT 74022
Score = 125 bits (138), Expect = 2e-23
Identities = 152/207 (73%), Gaps = 0/207 (0%)
Strand=Plus/Minus
Query 104357 TGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGT 104416
|| || || ||||| || || || || |||||||| | |||||| || ||||| | |||
Sbjct 481475 TGCAAAGTGGATTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTGCCATCTTCCAATTGC 481416
Query 104417 TTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTT 104476
|| |||||||| || | || ||||| ||||| || || ||||| || || || |||||
Sbjct 481415 TTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTTGTCTTGGATCTTG 481356
Query 104477 GCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTA 104536
| || ||||| || | || || || ||| || ||||| |||||||||||||| ||
Sbjct 481355 GACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCTAGGGTAATAGTCTTACCGGTT 481296
Query 104537 AGTGTTTTTACAAATATCTGCATTTTG 104563
| || || || || || ||||| |||
Sbjct 481295 AAAGTCTTGACGAAAATTTGCATCTTG 481269
>seq10
Length=750185
Score = 181 bits (200), Expect = 2e-40
Identities = 379/556 (68%), Gaps = 28/556 (5%)
Strand=Plus/Plus
Query 268754 GCCGTTGCTTCTTTTTGGACTGTAGAAGAAGTAGATCTGTCTTATGAC-TTAATAGATTG 268812
|||| || ||||| ||||| | |||||| | ||| ||||| | || || || || ||
Sbjct 397589 GCCGAAGCCTCTTTCTGGACCGCTGAAGAAATTGATTTGTCTAAGGATATTCAT-GACTG 397647
Query 268813 GAAAAATTTAA--AACCAGAA-GAAAGAAGATTTATATCTTATATTCTTGCGTTTTTTGC 268869
||| || || ||| | || || ||| ||||| ||| ||||||| ||||| ||
Sbjct 397648 GAACAACAGAATGAACGAAAACGAGAGATTTTTTATTTCTAGAGTTCTTGCCTTTTTCGC 397707
Query 268870 AGTTAGTGATGGTATCGTTAACGAAAATCTAGTAGAGAAGTTCTGTCAAGAGGTACAGAT 268929
| | ||| ||||| ||||| ||||| | || || || |||| | || || || ||
Sbjct 397708 CGCTTCTGACGGTATTGTTAATGAAAACTTGGTTGAAAACTTCTCTACCGAAGTTCAAAT 397767
Query 268930 TCCTGAAGCCAGATGTTTTTACGGATTCCAGATAGCTATAGAAAATATTCATTCAGAGAT 268989
||| || || | |||| || || |||||||| || |||||||||||||| || |
Sbjct 397768 TCCAGAGGCAAAGAGTTTCTATGGTTTCCAGATCATGATTGAAAATATTCATTCTGAAAC 397827
Query 268990 GTACAGTCTATTAATAGATACTTATATAGATGATAACAACGAAAAGAAAAGACTATT-TT 269048
||| |||| || ||||| || ||| | || | ||| |||| ||| ||
Sbjct 397828 TTACTCCTTATTGATCGATACCTACATAAAGGA------CCCTAAGGAAAGTGAATTCTT 397881
Query 269049 CTTCTATGAGA-----ACTAT----GGACTGTGTGAGaaaaaaaTCTGAATGGGCTCTGA 269099
||| ||| | || || | | | ||||||| | || |||||||| |
Sbjct 397882 GTTCAATGCCATTCACACCATCCCAGAAATCGGTGAGAAGG----CCGAGTGGGCTCTAA 397937
Query 269100 AATGGATAAACGATAGCG-CGCCTTAC--GGAGAAAGGTTAGTTGCTTTTGCCGCTGTAG 269156
|||||| | || | |||||| || ||||| |||| || |||||| || | |
Sbjct 397938 GATGGATTCAAGACGCTGACGCCTTGTTTGGTGAAAGACTAGTCGCCTTTGCCTCTATCG 397997
Query 269157 AAGGTATATTCTTTTCGGGGTCTTTTGCCGCTATCTTTTGGTTGAAGAAAAGAGGCCTTA 269216
||||| | ||||| || || || || || | || || ||||||||||| ||||| | |
Sbjct 397998 AAGGTGTCTTCTTCTCCGGTTCCTTCGCTTCCATTTTCTGGTTGAAGAAGAGAGGTATGA 398057
Query 269217 TGCCAGGATTAACTTTCTCTAACGAATTGATAAGCAGGGACGAAGGTTTACACTGCGACT 269276
|||| || || || ||||||||||||||||| |||| ||||||||||| ||| |||||
Sbjct 398058 TGCCCGGTTTGACCTTCTCTAACGAATTGATTTGCAGAGACGAAGGTTTGCACACCGACT 398117
Query 269277 TCGCTTGTTTATTATT 269292
| || || ||||| ||
Sbjct 398118 TTGCATGCTTATTGTT 398133
>seq9
Length=439147
Score = 141 bits (156), Expect = 2e-28
Identities = 164/221 (74%), Gaps = 0/221 (0%)
Strand=Plus/Minus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
|| || ||||| | || | |||| ||||| || |||||||| ||||| |||||||||
Sbjct 64697 ATACCACCTCTCAATCTCAAGACTAAGTGTAAAGTGGATTCTTTTTGAATGTTATAGTCA 64638
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
|| | |||||||||||||| | ||| || |||||||| || | || ||||| |||||
Sbjct 64637 GACAAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGT 64578
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509
|| || ||||| || || |||||||||| || ||||| || | || || || |||
Sbjct 64577 GGGATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCA 64518
Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAA 104550
|| || | || || ||||||||||| | || || |||||
Sbjct 64517 ACTTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACAAA 64477
>seq11
Length=681961
Score = 132 bits (146), Expect = 1e-25
Identities = 153/206 (74%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
|| || ||||||| || | || | |||||| || ||||| || || || || ||||||
Sbjct 632814 ATACCACCTCTTAATCTCAAAACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCA 632873
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
|||| ||||||||||||||| | ||| || || ||||| || | || ||||| |||||
Sbjct 632874 GATAAAGTTCTACCGTCTTCCAATTGCTTACCGGCAAAGATCAATCTTTGTTGGTCAGGT 632933
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509
|| || ||||| || || || ||||| | || ||||| || | ||| || || |||
Sbjct 632934 GGGATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCA 632993
Query 104510 ACCTCTAGTGTAATAGTCTTACCAGT 104535
|| |||| || || |||||||||||
Sbjct 632994 ACTTCTAAAGTGATGGTCTTACCAGT 633019
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1151398149211036
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |