Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079175.1_202017-03- 21] 17 sequences; 11,929,789 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq12 123 2e-23 >seq12 Length=1041178 Score = 123 bits (136), Expect = 2e-23 Identities = 161/223 (72%), Gaps = 0/223 (0%) Strand=Plus/Plus Query 48512 CTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCG 48571 ||||| |||||||| | ||| ||||||||| |||||||| || | ||| || | Sbjct 74492 CTTAATACTAAATGTAAAGTGGACTCCTTTTGGATGTTGTAGTCGGACAAGGTTCTACCA 74551 Query 48572 TCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTG 48631 || ||||| ||||||||| | |||| || | ||| || ||| || | || ||| ||| Sbjct 74552 TCTTCCAGTTGCTTACCGGCAAAAATCAACCTCTGTTGGTCCGGAGGAATACCTTCTTTG 74611 Query 48632 TCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATG 48691 ||| |||||| ||||| | |||||||| | ||| || || | ||||||| Sbjct 74612 TCCTGAATTTTTGACTTGACGTTATCAATGGTATCAGAAGATTCGACTTCCAATGTTATG 74671 Query 48692 GTTTTACCGGTGAGAGTTTTCACAAAAATCTGCATCGTGTCTT 48734 ||||||||||| | ||| || |||||||| ||||| |||||| Sbjct 74672 GTTTTACCGGTCAAAGTCTTGACAAAAATTTGCATAATGTCTT 74714 Score = 104 bits (114), Expect = 2e-17 Identities = 162/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 48499 ACCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGC 48558 ||| || | ||| || || ||||| || || || |||||||||||| ||||| || | Sbjct 74251 ACCACCTCTCAATCTCAAGACTAAGTGGAGAGTAGACTCCTTTTGAATATTGTAGTCGGA 74310 Query 48559 CAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGG 48618 ||| || | || ||||| ||||||||| | |||| || | ||| || ||| || Sbjct 74311 CAAGGTTCTACCATCTTCCAGTTGCTTACCGGCAAAAATCAACCTCTGTTGGTCCGGAGG 74370 Query 48619 CACACTTTCCTTGTCCATAATTTTCTGCTTGA--TAGACGCTATGGTATCGGTAGACTCC 48676 | || ||| |||||| |||||| ||||| | | || || || |||| ||| || Sbjct 74371 AATACCTTCTTTGTCCTGAATTTTTGACTTGACGTTGTCG--ATCGTGTCGGAAGATTCG 74428 Query 48677 GTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 ||||| ||||| || ||||| || || || || ||||| |||||||| Sbjct 74429 ACCTCGAGGGTTATAGTCTTACCAGTCAGCGTCTTAACAAAGATCTGCAT 74478 Score = 86.0 bits (94), Expect = 5e-12 Identities = 159/230 (69%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 48499 ACCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGC 48558 ||| || | ||||||||| || | || || || ||||||||||||||||| || | Sbjct 73795 ACCACCCCTCAACCTTAAGACCAGGTGGAGAGTAGATTCCTTTTGAATGTTGTAGTCGGA 73854 Query 48559 CAATTGTC--GCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACC 48616 || ||| || | || ||||| ||||||||| | |||| || | ||| || ||| Sbjct 73855 TAA-CGTCCTGC-CATCTTCCAGTTGCTTACCGGCAAAAATCAATCTCTGTTGGTCCGGA 73912 Query 48617 GGCACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCC 48676 || | || |||||| ||| ||| || ||| | | || || |||| || || Sbjct 73913 GGAATACCTTCCTTATCCTGAATCTTGCTCTTCACGTTATCAATAGTGTCGGACGATTCA 73972 Query 48677 GTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 ||||| |||||||| ||||| || || || || |||||||| ||||| Sbjct 73973 ACCTCGAGGGTTATGGTCTTACCCGTCAGTGTCTTAACAAAAATTTGCAT 74022 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421251112722017