Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079175.1_202017-03-
21] 17 sequences; 11,929,789 total letters
Query= NC_005902.1
Length=186250
Score E
Sequences producing significant alignments: (Bits) Value
seq15 147 3e-30
seq2 107 2e-18
>seq15
Length=1052871
Score = 147 bits (162), Expect = 3e-30
Identities = 304/451 (67%), Gaps = 35/451 (8%)
Strand=Plus/Plus
Query 6810 TTGTTCTTTTATAGCTTTTATATGATCTAAATAAATATGAGCATCTCCTAGCGTATGAAT 6869
||||||||| | |||| || || || ||||| ||| ||||| ||||| ||||||||
Sbjct 438714 TTGTTCTTTCAAGGCTTCAATGTGGTCCTTATAAACATGTGCATCCCCTAGAGTATGAAT 438773
Query 6870 AAATTCACCTGGTTTCATATCAACAGCTTGAGCAATTAAATATGTTAATAATGCATAAGA 6929
||| |||||||| | ||| || ||| ||| |||||| | || || | ||||| ||
Sbjct 438774 AAACTCACCTGGCTCCATGTCGACAACTTTAGCAATCATTCTAGTCAACAGAGCATATGA 438833
Query 6930 AGCTACATTAAAAGGTACACCTAATCCCATATCTGCTGATCTTTG--ATAACAT---TGA 6984
|| | |||||| ||||| || |||||||| || || | ||| |||||| |||
Sbjct 438834 TGCAATATTAAATGGTACGCCCAATCCCATGTCACAAGAACGTTGGTATAACAAACATGA 438893
Query 6985 CAAGA------TAAAATATTG-------TCTATAG---------CATAAAATTGACACAA 7022
| | || | || ||| | | |||||||||| | ||
Sbjct 438894 TAGGCGGGGCTTACCAGATCCGTCTCCTTCTTTGGGGAAACTGACATAAAATTGTGAAAA 438953
Query 7023 TACATGACATGGAGGTAAAACAGCCTGATCTATATCAGATGGATTCCAAGCAGTCATTAA 7082
| || ||||| || ||| | || || | ||||| ||||||||||||| |||| |
Sbjct 438954 AATGTGGCATGGTGGCAAAGCCATCTTGTCAAAATCAGCTGGATTCCAAGCACTCATAAT 439013
Query 7083 AATACGTCTATCATTTGGATTTGTTTTTAATTT-TGTTATAATTATTTG---TAATTGAT 7138
||| | |||||||| |||||||| |||| ||| || ||| | || |||||||
Sbjct 439014 AATTCTTCTATCATAAGGATTTGTCTTTAGTTTATG----AATGACCTGCTTCAATTGAT 439069
Query 7139 CTATACCCTGACCTTCATAATTAGTATGACAATTTATATAATTAGCTCCAAAATGTCTCC 7198
| |||||||| || |||| | || ||| | | || ||||| || ||||| ||||
Sbjct 439070 CAATACCCTGTCCAGCATAGTCGTCATCACAGGTCTTGTATTTAGCACCGAAATGCCTCC 439129
Query 7199 ATTGAAACCCATAAATAGGACCTAAATCACC 7229
|||| || ||||||| || |||||||| ||
Sbjct 439130 ATTGGAATCCATAAACGGGCCCTAAATCCCC 439160
Score = 96.9 bits (106), Expect = 4e-15
Identities = 127/176 (72%), Gaps = 0/176 (0%)
Strand=Plus/Minus
Query 19328 GTTAAAATTAAATTAAGATCTTCTAAAATACCTGAAATAGGTGATAAGTTTGCTTCTTTT 19387
|||||| || ||||| || | || | ||| |||| ||||| || ||||| ||| |
Sbjct 579814 GTTAAAGTTCGTGTAAGAACTACAAAGGTTCCTCAAATTGGTGACAAATTTGCCTCTCGT 579755
Query 19388 ACTGCTCAAAAAGGCACATGTGGTATGATTTATCGTCAAGAAGATATGCCTTTTACTAAA 19447
|| |||||| || || |||||| | |||||| |||||||||||| ||||| |
Sbjct 579754 CATGGTCAAAAGGGTACTATTGGTATCACATATCGTAGAGAAGATATGCCATTTACAGCA 579695
Query 19448 GATGGTATAGTGCCGGATCTTATTATTAACCCACATGCTTTTCCAAGTCGAATGAC 19503
|| ||||| || |||||| | || || || || || ||| ||||| ||| |||||
Sbjct 579694 GAAGGTATTGTTCCGGATTTAATCATCAATCCTCACGCTATTCCATCTCGTATGAC 579639
Score = 89.7 bits (98), Expect = 6e-13
Identities = 112/151 (74%), Gaps = 2/151 (1%)
Strand=Plus/Minus
Query 19354 AATACCTGAAATAGGTGATAAGTTTGCTTCTTTTACTGCTCAAAAAGGCACATGTGGTAT 19413
|| ||||||| |||||||||| ||| ||||| || ||||||||| ||||||||
Sbjct 690219 AAGACCTGAATTAGGTGATAAATTTTCTTCTAGACATGGTCAAAAAGGTGTTTGTGGTAT 690160
Query 19414 GATT-TATCGTCAAGAAGATATGCCTTTTACTAAAGATGGTATAGTGCCGGATCTTATTA 19472
||| || | ||||||||||||||||||| | | |||||||| || || |||| |
Sbjct 690159 TATTGTAAAG-CAAGAAGATATGCCTTTTAACGATCAAGGTATAGTTCCAGACATTATCA 690101
Query 19473 TTAACCCACATGCTTTTCCAAGTCGAATGAC 19503
| || || || | ||| ||| ||| |||||
Sbjct 690100 TGAATCCTCACGGTTTCCCATCTCGTATGAC 690070
>seq2
Length=801843
Score = 107 bits (118), Expect = 2e-18
Identities = 385/591 (65%), Gaps = 32/591 (5%)
Strand=Plus/Minus
Query 164398 AATTTTGAAGAAATGGGAGTAGGTGGACTAGATCGAGAATTTTCTCTTATTTTCAGACGA 164457
|| |||||||| |||| || ||||| | ||| ||||||| || ||||| ||| ||
Sbjct 385120 AAGTTTGAAGATTTGGGTGTCGGTGGTTTGGATAAAGAATTTACTAAAATTTTTAGAAGA 385061
Query 164458 GCATTTGCTTCTAGATCAGTTCCT--ATCGAAATAATaaaaaaaTTAGGCTGTAAACATA 164515
|| ||||| | || |||| ||| | | ||| |||| | || | ||
Sbjct 385060 GCTTTTGCAAGTCGAATTTTTCCGCCATC--AGTTATAGAAAAGCTGGGTATTTCTCACG 385003
Query 164516 TAAAAGGAATTTTATTACATGGACCTCCTGGTTGCGGTAAAACATTAATGGCTCGATGCA 164575
| ||||| | ||||| | || ||||| ||| ||||| || ||||| || || |
Sbjct 385002 TCAAAGGTTTGTTATTGTACGGTCCTCCGGGTACTGGTAAGACCTTAATTGCAAGAAAGA 384943
Query 164576 TTGCT-CAAGCTTTTAAATCGC---GACCCGTTAAAATTGTTAATGGTCCTGAATTATTG 164631
||| | ||| | | ||| | || || ||||| || || ||||||||| | |||
Sbjct 384942 TTGGTACAA--TGCTGAATGCCAAAGAGCCC--AAAATCGTCAACGGTCCTGAAATTTTG 384887
Query 164632 AACAAATATGTAGGTGAGTCAGAAGCTAATGTTAGAAAGTTGTTTCAGGAGGCTGAAGAA 164691
| || || || || || || | ||| || | || || ||| |||| || |||| |
Sbjct 384886 AGTAAGTACGTTGGATCTTCGGAGGAGAATATTCGTAATTTATTTAAGGATGCCGAAGCA 384827
Query 164692 GAACAAAAGAAAGC--AGGTTTAGCTA--GTAAATTACATGTTATTGTTTTTGATGAGAT 164747
||| | | || ||| | || | || |||||| | ||| |||||||||| |
Sbjct 384826 GAATATCGG---GCCAAGGGTGAGGAATCGTCC-TTACATATCATTATTTTTGATGAACT 384771
Query 164748 AGATGCTCTTTGCAAAAA---------ACGTGGTGATAATATTATTCATGATG-CAGTG- 164796
||| || ||| ||| | | | |||||| || | | || || ||
Sbjct 384770 GGATTCTGTTTTCAAGCAGAGAGGTTCAAGAGGTGATGGTACCGGTGTAGGTGACAATGT 384711
Query 164797 -GTTAATCAGTTGCTTTCTAAAATAGATGGTGTAGAATCCTTAAATAATATTTTAATTGT 164855
|||||||| || | ||||||| |||||||| || || |||||||| || || |
Sbjct 384710 AGTTAATCAATTATTAGCTAAAATGGATGGTGTTGATCAATTGAATAATATATTGGTTAT 384651
Query 164856 AGGTATGACCAACCGACCTGATTTAATTGATGATGCTTTATTACGACCTGGTCGATTAGA 164915
|||||||||||||| |||||||| ||| |||| | ||||| || ||| |||| ||
Sbjct 384650 TGGTATGACCAACCGTAAGGATTTAATAGATAGTGCTCTTTTACGTCCAGGTAGATTTGA 384591
Query 164916 ATTGAAAATAGAAATAGGATTACCCGACAAAGAAGGACGCCTTCAAATTTT 164966
| | || | ||||| ||||| ||| || ||||| | || ||||||||
Sbjct 384590 AGTCCAAGTTGAAATTCATTTACCGGACGAAAAAGGAAGACTCCAAATTTT 384540
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 595871873377200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |