Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079175.1_202017-03-
21] 17 sequences; 11,929,789 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq14 125 1e-24
seq2 104 4e-18
>seq14
Length=769517
Score = 125 bits (138), Expect = 1e-24
Identities = 190/268 (71%), Gaps = 2/268 (1%)
Strand=Plus/Plus
Query 16433 GCTAAGCGTCATCG-CAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|||||||||||| | |||| ||| |||||||||||||||| ||||| |||||||||||
Sbjct 553332 GCTAAGCGTCATAGAAAGAT-TCTAAGAGATAACATCCAAGGTATCACTAAGCCAGCTAT 553390
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
| | | | ||| | | ||||| ||||||||| | ||||| ||| |||| ||||| |
Sbjct 553391 CAGAAGATTAGCTAGAAGAGGTGGTGTCAAGCGTATTTCTGGTTTGATCTACGAAGAAGT 553450
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
| | ||| ||||| |||| | || |||| ||| || || | || || ||
Sbjct 553451 CAGAGCTGTCTTGAAATCCTTCTTGGAGTCCGTCATCAGAGACTCTGTTACTTACACTGA 553510
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
||||| || | |||||||| || || ||||| | || || || ||||| | |||||
Sbjct 553511 ACACGCCAAGAGAAAGACTGTTACTTCTTTGGATGTTGTTTACGCTTTGAAGAGACAAGG 553570
Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAA 16699
| | | |||||||| || |||||
Sbjct 553571 TAGAACCTTATATGGTTTCGGTGGTTAA 553598
>seq2
Length=801843
Score = 104 bits (114), Expect = 4e-18
Identities = 186/269 (69%), Gaps = 2/269 (1%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| |||||||| | | ||| ||| |||| ||||| ||||| ||||| |||||||||||
Sbjct 246896 GCCAAGCGTCACAGAAAGAT-TCTAAGAGACAACATTCAAGGTATCACTAAGCCAGCTAT 246838
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
| | | ||| | | ||||| ||||||||| ||||||| ||| |||| ||||| |
Sbjct 246837 TAGAAGATTAGCTAGAAGAGGTGGCGTCAAGCGTATCTCTGGTTTGATCTACGAAGAAGT 246778
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
| | ||| ||||| |||| | | |||| ||| || || | || || ||
Sbjct 246777 CAGAGCTGTCTTGAAATCCTTCTTGGAATCCGTCATCAGAGACTCTGTTACTTACACTGA 246718
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
||||| || | |||||||| || || ||||| | || ||||| || || | |||||
Sbjct 246717 ACACGCCAAGAGAAAGACTGTTACTTCTTTGGATGTTGTTTATGCTTTAAAGAGACAAGG 246658
Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAAT 16700
| | | |||||||| || ||||||
Sbjct 246657 TAGAACCTTATATGGTTTCGGTGGTTAAT 246629
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79075184456781
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |