Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079175.1_202017-03- 21] 17 sequences; 11,929,789 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq10 102 9e-17 >seq10 Length=750185 Score = 102 bits (112), Expect = 9e-17 Identities = 344/536 (64%), Gaps = 9/536 (2%) Strand=Plus/Minus Query 21467 AACATCAAACATGCAAAATCACAATGCAAACCTTCATCCCTACTTATTAATTCATTAGAA 21526 |||| || |||||||| || ||||||||||| || || | || ||||| ||||| Sbjct 398133 AACAATAAGCATGCAAAGTCGGTGTGCAAACCTTCGTCTCTGCAAATCAATTCGTTAGAG 398074 Query 21527 AATGTTAAACCGGGCATTAATCCTCTCTTTTTTAACCAAAATATTGACGCAAATGCTCCT 21586 || || ||||||||||| | |||||||| || ||||| || || || || || | || Sbjct 398073 AAGGTCAAACCGGGCATCATACCTCTCTTCTTCAACCAGAAAATGGAAGCGAAGGAACCG 398014 Query 21587 GAAAAGAAAATGCCCTCAACGGCAGCAAATGCAACTAATCGTTCACCGTATGTAGATTCT 21646 || ||||| | || || | | ||||| || |||| || |||||| | | || Sbjct 398013 GAGAAGAAGACACCTTCGATAGAGGCAAAGGCGACTAGTCTTTCACCAAACAAGGCGTCA 397954 Query 21647 TTATCCAATATCCATTTTTCTGCCCATTTTGCCTTTTCTTTAATACAATCAATTGTATCA 21706 || |||||| || ||||| | ||||| || || || || | | Sbjct 397953 GCGTCTTGAATCCATCTTAGAGCCCACTCGGCCTTCTCACCGATTTCTGGGATGGTGTGA 397894 Query 21707 ATAGCTTTTAA-AAGATGAtttt-tttCATCTACATCGGTTATGNNNNNNNNNNNNNNNN 21764 || || || || |||| ||| |||| | || ||||| Sbjct 397893 ATGGCATTGAACAAGA--ATTCACTTTCCTTAGGGTCCTTTATGTAGGTATCGATCAATA 397836 Query 21765 NACTATACATTTCAGAATGTATATTTTCTATCGCTATCTGAAATCCGTAAAAACATCTTG 21824 || |||||||||| |||||||| ||| ||||| || || || |||| ||| Sbjct 397835 AGGAGTAAGTTTCAGAATGAATATTTTCAATCATGATCTGGAAACCATAGAAACTCTTTG 397776 Query 21825 CCTCTGAACATTGAACCTCGGAATAAAATCGTTGAGCCAAGTTTTCATTTACTATTCCAT 21884 |||||| | |||||| |||| | | || || | ||||||||||||| || || || | Sbjct 397775 CCTCTGGAATTTGAACTTCGGTAGAGAAGTTTTCAACCAAGTTTTCATTAACAATACCGT 397716 Query 21885 CACTGGCGGCAAAAAATGCCAATATATTTTTTATAAAATATCGTTCGTTATCTGTTAAT- 21943 || ||||| ||||| || | | | |||||| ||| ||||| || ||| || Sbjct 397715 CAGAAGCGGCGAAAAAGGCAAGAACTCTAGAAATAAAAAATCTCTCGTTTTC-GTTCATT 397657 Query 21944 ---TTTTTCCAATCTAATAAATCTTTTGATAAATCTACTTCTTCAGTTGTCCAAAA 21996 || ||||| || | ||| || || ||||| | |||||||| ||||| || Sbjct 397656 CTGTTGTTCCAGTCATGAATATCCTTAGACAAATCAATTTCTTCAGCGGTCCAGAA 397601 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531900686971080