Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079175.1_202017-03-
21] 17 sequences; 11,929,789 total letters
Query= NC_006966.1
Length=166259
Score E
Sequences producing significant alignments: (Bits) Value
seq10 102 9e-17
>seq10
Length=750185
Score = 102 bits (112), Expect = 9e-17
Identities = 344/536 (64%), Gaps = 9/536 (2%)
Strand=Plus/Minus
Query 21467 AACATCAAACATGCAAAATCACAATGCAAACCTTCATCCCTACTTATTAATTCATTAGAA 21526
|||| || |||||||| || ||||||||||| || || | || ||||| |||||
Sbjct 398133 AACAATAAGCATGCAAAGTCGGTGTGCAAACCTTCGTCTCTGCAAATCAATTCGTTAGAG 398074
Query 21527 AATGTTAAACCGGGCATTAATCCTCTCTTTTTTAACCAAAATATTGACGCAAATGCTCCT 21586
|| || ||||||||||| | |||||||| || ||||| || || || || || | ||
Sbjct 398073 AAGGTCAAACCGGGCATCATACCTCTCTTCTTCAACCAGAAAATGGAAGCGAAGGAACCG 398014
Query 21587 GAAAAGAAAATGCCCTCAACGGCAGCAAATGCAACTAATCGTTCACCGTATGTAGATTCT 21646
|| ||||| | || || | | ||||| || |||| || |||||| | | ||
Sbjct 398013 GAGAAGAAGACACCTTCGATAGAGGCAAAGGCGACTAGTCTTTCACCAAACAAGGCGTCA 397954
Query 21647 TTATCCAATATCCATTTTTCTGCCCATTTTGCCTTTTCTTTAATACAATCAATTGTATCA 21706
|| |||||| || ||||| | ||||| || || || || | |
Sbjct 397953 GCGTCTTGAATCCATCTTAGAGCCCACTCGGCCTTCTCACCGATTTCTGGGATGGTGTGA 397894
Query 21707 ATAGCTTTTAA-AAGATGAtttt-tttCATCTACATCGGTTATGNNNNNNNNNNNNNNNN 21764
|| || || || |||| ||| |||| | || |||||
Sbjct 397893 ATGGCATTGAACAAGA--ATTCACTTTCCTTAGGGTCCTTTATGTAGGTATCGATCAATA 397836
Query 21765 NACTATACATTTCAGAATGTATATTTTCTATCGCTATCTGAAATCCGTAAAAACATCTTG 21824
|| |||||||||| |||||||| ||| ||||| || || || |||| |||
Sbjct 397835 AGGAGTAAGTTTCAGAATGAATATTTTCAATCATGATCTGGAAACCATAGAAACTCTTTG 397776
Query 21825 CCTCTGAACATTGAACCTCGGAATAAAATCGTTGAGCCAAGTTTTCATTTACTATTCCAT 21884
|||||| | |||||| |||| | | || || | ||||||||||||| || || || |
Sbjct 397775 CCTCTGGAATTTGAACTTCGGTAGAGAAGTTTTCAACCAAGTTTTCATTAACAATACCGT 397716
Query 21885 CACTGGCGGCAAAAAATGCCAATATATTTTTTATAAAATATCGTTCGTTATCTGTTAAT- 21943
|| ||||| ||||| || | | | |||||| ||| ||||| || ||| ||
Sbjct 397715 CAGAAGCGGCGAAAAAGGCAAGAACTCTAGAAATAAAAAATCTCTCGTTTTC-GTTCATT 397657
Query 21944 ---TTTTTCCAATCTAATAAATCTTTTGATAAATCTACTTCTTCAGTTGTCCAAAA 21996
|| ||||| || | ||| || || ||||| | |||||||| ||||| ||
Sbjct 397656 CTGTTGTTCCAGTCATGAATATCCTTAGACAAATCAATTTCTTCAGCGGTCCAGAA 397601
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 531900686971080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |