Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079175.1_202017-03-
21] 17 sequences; 11,929,789 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq5 235 1e-56
seq15 120 8e-22
>seq5
Length=1007496
Score = 235 bits (260), Expect = 1e-56
Identities = 712/1078 (66%), Gaps = 49/1078 (5%)
Strand=Plus/Plus
Query 363547 TTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCT 363606
|| || || ||| | ||||| ||| |||||||| |||| || || || ||||| |||
Sbjct 296311 TTTACTCATGCCTCTCCAACTTTGTTTAATGCTGGTACTCCAAAACCTCAAATGTCCTCT 296370
Query 363607 TGCTTTCTTC-TAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAA 363665
|| |||||| | |||||||| || || ||||||||||| | ||||| | || |
Sbjct 296371 TG-TTTCTTGGTCGCCATGAAGGAGGACTCTATCGAGGGTATTTACGACACTTTGAAAGA 296429
Query 363666 TTGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC 363725
|||||| | |||||||| | ||| || || |||||| || || || || ||||| |
Sbjct 296430 ATGTGCTTTGATTTCCAAAACTGCTGGTGGTATTGGTCTACATATTCATAACATTCGTTC 296489
Query 363726 ACAGAACAG----TTACATTCGCGGCACAGGGGGATAC-TCGAATGGGCTGGTTCCCATG 363780
||| | ||||||| || ||| || ||| || || ||| | ||||||||
Sbjct 296490 ----AACTGGTTCTTACATTGCTGGTACAAATGG-TACTTCTAACGGGTTAATTCCCATG 296544
Query 363781 CTTCGTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGG--AGGAAAGCGCAAAG 363838
||||||| ||| | ||||| || | || |||||||||||||| | |||| | |
Sbjct 296545 ATTCGTGTTTTTAATAATACCGCCCGTTATGTCGACCAGGGTGGTAACAAAAGACC--TG 296602
Query 363839 GGGCGTTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCC 363898
| || |||||| |||| || || || ||||| ||||| ||||| ||| |||| ||
Sbjct 296603 GTGCCTTTGCTCTGTACCTGGAACCATGGCATGCTGATATCTTTGATTTTATTGATATCA 296662
Query 363899 GGAAAAACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTT 363958
| || ||| || ||||| ||| | |||||| | ||| |||| ||| || ||| ||
Sbjct 296663 GAAAGAACCACGGTAAAGAAGAAATTCGTGCAAGAGATTTGTTTCCTGCTCTGTGGATTC 296722
Query 363959 CTGACCATTTTATGAAGCGCGTGGAGGCAGGTAAGAATTGGTCACTCTTTTGCCCACACG 364018
|||| | ||| ||||| || || || | | | || |||| | | || | ||| |
Sbjct 296723 CTGATCTTTTCATGAAACGTGTCGAAGAAAATGGGACTTGGACTTTGTTCTCTCCAACAG 296782
Query 364019 AATGTCCAGGTCTTTCCGA-TGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTAT 364077
| ||| ||||| ||| ||| | |||||||| | || |||||||| ||
Sbjct 296783 CAGCTCCCGGTCTAAGCGACTGT-TACGGTGACGATTTTGAAGCTCTATATACCCGCTAC 296841
Query 364078 GAATCGGAGGGAAAGGC-TCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCAT 364136
||| | ||| | | | ||||||| ||| || || || |||||| | |||| |
Sbjct 296842 GAA----AAAGAAGGTCGTGGTAAGACCATTAAAGCTCAAAAATTATGGTATTCCATTTT 296897
Query 364137 GGATTCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAA 364196
||| | || | ||| || || ||||| | | || | || || ||| | |||||| | ||
Sbjct 296898 GGAAGCACAAACTGAAACTGGTACACCTTTTGTGGTTTATAAGGATGCTTGCAACAGAAA 296957
Query 364197 GTCCAACCAGCAGCACCTTGGTACAATTCAG-CAGAGCAACCTATGTACCGAGATTATTG 364255
||| ||||| | || | ||| || || || | ||| |||| || ||| |||
Sbjct 296958 GTCTAACCAAAAAAACTTGGGTGTTATCAAGTCATCG-AACTTATGCTGTGAAATTGTTG 297016
Query 364256 AATACACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGT 364315
| ||| | ||||| ||||| ||||| || |||||| | || || | || | || ||||
Sbjct 297017 AGTACTCAGCTCCGGACGAAACTGCTGTTTGTAACTTGGCTTCCGTTGCCTTGCCAGCGT 297076
Query 364316 ---TTGTAA------AAGATGG---TACTTTTGACCACCAGCATC-----TTTATGACGT 364358
||| || | || || |||| | || || | || ||| |||
Sbjct 297077 TCATTGAAACGTCAGAGGACGGCCAAACTTCT-ACTTACAACTTCAAAAAATTA-CACGA 297134
Query 364359 AA---CCTATCATGCTACTTGCAATCTCGACAAGGTTATCGACAAGAATTATTATCCAAT 364415
|| || | || |||| | ||| | ||| ||||| || ||||| || || ||
Sbjct 297135 AATTGCCAAAGTTGTTACTCGTAATTTAAACAGAGTTATTGATCGTAATTACTACCCCAT 297194
Query 364416 TCCTGAAGCCGAG-CGTTCTAATATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCC 364474
| |||| |||| | || |||||| | ||| | || |||| | ||||| || ||
Sbjct 297195 TGAAGAAG-CGAGAAGATCCAATATGAGACATAGGCCAATTGCCTTGGGTGTTCAAGGTT 297253
Query 364475 TCGCTGACGTTTTTATGATGCTCAAGATGGCATTTGATTCGCCTGACGCTCGTGTTCTAA 364534
| |||||| ||||||| |||| | | |||||||| || || ||| | ||||
Sbjct 297254 TGGCTGACACTTTTATGTTGCTACGTTTACCCTTTGATTCTGAAGAGGCCCGTTTACTAA 297313
Query 364535 ATAAGGAGATCTTTGAAACAATGTATTTTGCCGCAATGACTGCTTCGTGTGATTTGGC 364592
||| | |||||||||||||| ||| |||| | ||| ||||| ||||| || ||
Sbjct 297314 ATATCCAAATCTTTGAAACAATTTATCATGCCTCCATGGAAGCTTCTTGTGAATTAGC 297371
>seq15
Length=1052871
Score = 120 bits (132), Expect = 8e-22
Identities = 209/299 (70%), Gaps = 10/299 (3%)
Strand=Plus/Minus
Query 111419 TGTAAAAATTTGGGATGGAAATGGATCACGTGACTTTCTAGATTCAGTTGGTCTTGTC-G 111477
||| || |||||||| || |||||||| ||||| | ||||||| || ||| || | |
Sbjct 439230 TGTTAAGATTTGGGACGGTAATGGATCCCGTGAATATCTAGATA-AGATGGGGTTCACAG 439172
Query 111478 ACAACGAAGAAGGTGATCTCGGACCAGTTTACGGATTTCAATGGCGCCACTTTGGTGCAG 111537
| | | | || ||| | || || ||||| ||||| |||||| | || || |||||
Sbjct 439171 ATAGAAAGGTGGGGGATTTAGGGCCCGTTTATGGATTCCAATGGAGGCATTTCGGTGCTA 439112
Query 111538 ACTACAAAACC----ATGCACGACTCATATGATTCACAGGGAACTGATCAATTACAGAAT 111593
| ||||| ||| ||| |||||| ||| | |||||| | ||||||||| || |
Sbjct 439111 AATACAAGACCTGTGATG-ACGACT---ATGCTGGACAGGGTATTGATCAATTGAAGCAG 439056
Query 111594 GTCATTGATCAAATTAAGAACAACCCAACTTCTCGTCGCATTATTATGAGTGCATGGAAC 111653
|||||| || || | |||| || || | | | | |||||||||||||| |||||
Sbjct 439055 GTCATTCATAAACTAAAGACAAATCCTTATGATAGAAGAATTATTATGAGTGCTTGGAAT 438996
Query 111654 CCAAATGCATTGGAAAAAATGGCACTTCCACCATGTCATCTTATGTGCCAGTTTTATGT 111712
||| || || || || ||||| | |||||||| || || | | || ||||||||
Sbjct 438995 CCAGCTGATTTTGACAAGATGGCTTTGCCACCATGCCACATTTTTTCACAATTTTATGT 438937
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303353316113294
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |