Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079175.1_202017-03- 21] 17 sequences; 11,929,789 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq12 129 5e-25 seq9 102 7e-17 >seq12 Length=1041178 Score = 129 bits (142), Expect = 5e-25 Identities = 167/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 |||||||||||||||||||| || || || ||||| || ||| | || || || | Sbjct 74250 ATGCAAATTTTTGTCAAAACTCTAACTGGTAAAACTATAACCCTAGAGGTTGAATCTTCC 74191 Query 115346 GACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 |||||| ||| |||| || ||| || || || ||||| || |||| ||||| Sbjct 74190 GACACTATTG-ACAACGTCAAAAGTAAGATCCAAGACAAAGAGGGTATCCCACCAGATCA 74132 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 ||||||||||||| ||| || || ||| | ||||| | | ||| || | |||||||| Sbjct 74131 ACAAAGACTTATTTTTGCTGGTAAGCAACTGGAAGACGGTAGAACGCTGTCTGATTATAA 74072 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 |||||| ||||| |||||| | ||| | ||| ||||||| |||| || Sbjct 74071 CATTCAGAAAGAATCTACTTTGCATTTAGTGCTGAGATTAAGAGGTGG 74024 Score = 98.7 bits (108), Expect = 8e-16 Identities = 162/231 (70%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 115283 AAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCC 115342 || ||||||||||| ||||| || | || || || || |||||| | ||| || || Sbjct 481270 AAGATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTAGAAGTTGAATCT 481329 Query 115343 AGCGACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGA 115401 |||||| || ||||| || || || || || || ||||| |||| ||| Sbjct 481330 TCTGACACTATT-GACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATCCCACCTGA 481388 Query 115402 TCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTA 115461 || |||||| | || | ||| || || ||||| ||||||| || ||| || | || || Sbjct 481389 CCAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGCAGAACTTTGTCTGACTA 481448 Query 115462 TAACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 ||||| ||||| || || ||| | || |||| ||||||||| |||| || Sbjct 481449 CAACATCCAAAAGGAATCCACTTTGCACTTGGTCTTGAGATTGAGAGGTGG 481499 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 |||||||||||||| || || || ||||| || ||||| ||| |||| || || | Sbjct 74022 ATGCAAATTTTTGTTAAGACACTGACGGGTAAGACCATAACCCTCGAGGTTGAATCGTCC 73963 Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405 |||||| ||| | || || || ||| ||||| ||||| | || || || Sbjct 73962 GACACTATTGATAACGTGAAGAGCAAGATTCAGGATAAGGAAGGTATTCCTCCGGACCAA 73903 Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465 || ||| | |||| ||| || || ||| | ||||||| || || | |||| || ||| Sbjct 73902 CAGAGATTGATTTTTGCCGGTAAGCAACTGGAAGATGGCAGGACGTTATCCGACTACAAC 73843 Query 115466 ATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGGAAA 115515 |||||||| || |||||| | || |||| || || ||| | || || || Sbjct 73842 ATTCAAAAGGAATCTACTCTCCACCTGGTCTTAAGGTTGAGGGGTGGTAA 73793 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||||||||||||||| || | || || |||||||| || | ||| || || Sbjct 74706 ATGCAAATTTTTGTCAAGACTTTGACCGGTAAAACCATAACATTGGAAGTCGAATCTTCT 74647 Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405 || || ||| | || || ||||||| || |||||||| | || || || Sbjct 74646 GATACCATTGATAACGTCAAGTCAAAAATTCAGGACAAAGAAGGTATTCCTCCGGACCAA 74587 Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465 || || | |||| ||| || || ||| | ||||||| | |||| || |||| || ||| Sbjct 74586 CAGAGGTTGATTTTTGCCGGTAAGCAACTGGAAGATGGTAGAACCTTGTCCGACTACAAC 74527 Query 115466 ATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 || ||||| ||||| ||| ||||| | || || ||| | |||| || Sbjct 74526 ATCCAAAAGGAGTCCACTTTACATTTAGTATTAAGACTAAGAGGTGG 74480 >seq9 Length=439147 Score = 102 bits (112), Expect = 7e-17 Identities = 156/220 (71%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 115294 TTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGCGACACTGT 115353 ||||||||| || | || || || ||||| || | ||| || || |||||| | Sbjct 64476 TTTTGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTAT 64535 Query 115354 TGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAGCAAAGAC 115412 || |||| || || ||| ||| || || ||||| |||| ||| || |||||| Sbjct 64536 TG-ACAATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGAT 64594 Query 115413 TTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAACATTCAAA 115472 | || | ||| || || ||||| ||||| | | |||| || | || ||||||||||||| Sbjct 64595 TGATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTATAACATTCAAA 64654 Query 115473 AAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 |||| || ||| |||| | || ||||||||| |||| || Sbjct 64655 AAGAATCCACTTTACACTTAGTCTTGAGATTGAGAGGTGG 64694 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425343911874040