Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079175.1_202017-03-
21] 17 sequences; 11,929,789 total letters
Query= NC_008035.3
Length=126629
Score E
Sequences producing significant alignments: (Bits) Value
seq12 116 3e-21
>seq12
Length=1041178
Score = 116 bits (128), Expect = 3e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768
|| |||| ||| || | ||| | ||| | |||||||||||||| ||||||||||||| |
Sbjct 74480 CCACCTCTTAGTCTTAATACTAAATGTAAAGTGGACTCCTTTTGGATGTTGTAGTCGGAC 74539
Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828
| |||| | | || |||| ||| || || ||| |||| | || |||||||||| |||
Sbjct 74540 AAGGTTCTACCATCTTCCAGTTGCTTACCGGCAAAAATCAACCTCTGTTGGTCCGGAGGA 74599
Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888
| || |||||||| ||||| ||| || | | | || || | || |
Sbjct 74600 ATACCTTCTTTGTCCTGAATTTTTGACTTGACGTTATCAATGGTATCAGAAGATTCGACT 74659
Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
|||| || |||||||| ||||||| || ||||||||||| |||||
Sbjct 74660 TCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACAAAAATTTGCAT 74706
Score = 100 bits (110), Expect = 2e-16
Identities = 144/203 (71%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792
|| || || ||||||||||| || |||||||||| || |||| | | || |||| |||
Sbjct 74276 TGGAGAGTAGACTCCTTTTGAATATTGTAGTCGGACAAGGTTCTACCATCTTCCAGTTGC 74335
Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852
|| || ||| |||| | || |||||||||| ||| | || |||||||| |||||
Sbjct 74336 TTACCGGCAAAAATCAACCTCTGTTGGTCCGGAGGAATACCTTCTTTGTCCTGAATTTTT 74395
Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTC 16912
||| || | | | | |||||| | || || | ||| || || || || |||
Sbjct 74396 GACTTGACGTTGTCGATCGTGTCGGAAGATTCGACCTCGAGGGTTATAGTCTTACCAGTC 74455
Query 16913 AGCGTTTTGACAAAAATCTGCAT 16935
||||| || ||||| ||||||||
Sbjct 74456 AGCGTCTTAACAAAGATCTGCAT 74478
Score = 87.8 bits (96), Expect = 1e-12
Identities = 147/210 (70%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 16727 ACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCC 16786
|||| || || || || |||||||| ||||||||||||| | || || | || |||
Sbjct 73814 ACCAGGTGGAGAGTAGATTCCTTTTGAATGTTGTAGTCGGATAACGTCCTGCCATCTTCC 73873
Query 16787 AATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCA 16846
| ||| || || ||| |||| | | |||||||||| ||| | || || || || |
Sbjct 73874 AGTTGCTTACCGGCAAAAATCAATCTCTGTTGGTCCGGAGGAATACCTTCCTTATCCTGA 73933
Query 16847 AT-TTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTT 16905
|| ||||| |||||| | | | ||||||| | || || | ||| ||||| ||
Sbjct 73934 ATCTTGCT-CTTCACGTTATCAATAGTGTCGGACGATTCAACCTCGAGGGTTATGGTCTT 73992
Query 16906 TCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
|| ||||| || || |||||||| |||||
Sbjct 73993 ACCCGTCAGTGTCTTAACAAAAATTTGCAT 74022
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 405087916070830
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |