Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079175.1_202017-03- 21] 17 sequences; 11,929,789 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq10 116 4e-21 >seq10 Length=750185 Score = 116 bits (128), Expect = 4e-21 Identities = 486/749 (65%), Gaps = 36/749 (5%) Strand=Plus/Minus Query 92790 CATAACACCACATTTTTGGTATTCCCCAACttttttttCAAAGAAATTTGTCTTTCCTTC 92849 |||||||||| |||||||| || |||| | ||||||||||| || ||||| || | Sbjct 398428 CATAACACCAGCCTTTTGGTAATCAGAAACTCTCTTTTCAAAGAAGTTGGTCTTACCAGC 398369 Query 92850 CAAAGATATCGAATTCACTA--GT-GATTGGATTCTTGGCGTTATAATACTTTTC---AC 92903 ||| || || | ||| || || || || || | | | || || ||||| | || Sbjct 398368 CAAGGAGAT-GTTTTCCATAAAGTCGAAGGGGTTTTCGACCTTGTAGTACTTCTTGTTAC 398310 Query 92904 CGAT--CAACTCGTACAATAATCTATCAGCTACAAATTCTATGTACTGAGACATCAAATC 92961 ||| |||| ||| | ||| ||||| || || || | || || ||| | || Sbjct 398309 CGAAAGCAAC-----CAAAAGTCTGTCAGCAACGAACTCAACATATTGGTTCATTAGGTC 398255 Query 92962 ACAATTCATTCCTAG-AAGACGTACAGGTAGAGCGTCGGTCAAGAA--ATCTTTCT-CGA 93017 | ||||| ||||| ||| | || || | ||||| ||| || |||||| | ||| Sbjct 398254 AGCGTTCATACCTAGCAAGGCA-ACTGGCAAGGCGTC---CAAAAAGTATCTTTGTTCGA 398199 Query 93018 TTACAACGGCTTCTTTCAAGATTTCTATTACTCTACTATT--TGG---TGGTTT-TTGTA 93071 || | || || || | | |||| | || || || ||| |||||| || | Sbjct 398198 TTTCCACAGCCTCGGTGACAATTTTT-----TCAACAATGGCTGGGTCTGGTTTGTTCTT 398144 Query 93072 CGACATAATTGTACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCA 93131 | | || | ||| |||||| ||||||||||| || ||||||||||||| | |||| Sbjct 398143 CAA-ATGGGCGAACAATAAGCATGCAAAGTCGGTGTGCAAACCTTCGTCTCTGCAAATCA 398085 Query 93132 ACTCATTGCTGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAG 93191 | || || ||| || ||||| || | || |||| ||||| | ||| || || |||| Sbjct 398084 ATTCGTTAGAGAAGGTCAAACCGGGCATCATACCTCTCTTCTTCAACCAGAAAATGGAAG 398025 Query 93192 CAAAACTACCAGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAA 93251 | || ||| || || || | |||||| | | ||||| || || | | ||| ||| Sbjct 398024 CGAAGGAACCGGAGAAGAAGACACCTTCGATAGAGGCAAAGGCGACTAGTCTTTCACCAA 397965 Query 93252 AATTTGCGGAATTACTGCTG-ATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAA 93310 | ||| | | || |||||| ||| |||||| ||||| || | || Sbjct 397964 ACAAGGCGTCA-GCGTCTTGAATCCATCTTAGAGCCCACTCGGCCTTCTCACCGATTTCT 397906 Query 93311 GGTAGTGTTTCGATAGCGTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTA 93370 || | || | || || || || | | | || | || | | || |||||| ||| Sbjct 397905 GGGATGGTGTGAATGGCATTGAACAAGAATTCACTTTCCTTAGGGTCCTTTATGTAGGTA 397846 Query 93371 TCGATTAACAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAG 93430 ||||| || | || || |||||||||| | ||| || || || ||||| || ||| Sbjct 397845 TCGATCAATAAGGAGTAAGTTTCAGAATGAATATTTTCAATCATGATCTGGAAACCATAG 397786 Query 93431 AAACATCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTG 93490 |||| | || || | || || ||||| ||| || | || || | |||||||| Sbjct 397785 AAACTCTTTGCCTCTGGAATTTGAACTTCGGTAGAGAAGTTTTCAACCAAGTTTTCATTA 397726 Query 93491 ACTATACCATCGGATGCTGCaaaaaaaGC 93519 || ||||| || || || || ||||| || Sbjct 397725 ACAATACCGTCAGAAGCGGCGAAAAAGGC 397697 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556860681667080