Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079175.1_202017-03-
21] 17 sequences; 11,929,789 total letters
Query= NC_008520.2
Length=132239
Score E
Sequences producing significant alignments: (Bits) Value
seq12 113 4e-20
seq9 84.2 2e-11
>seq12
Length=1041178
Score = 113 bits (124), Expect = 4e-20
Identities = 152/212 (72%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246
||||||||||||||||| || ||||||| |||||||| || ||||| ||| |
Sbjct 74706 ATGCAAATTTTTGTCAAGACTTTGACCGGTAAAACCATAACATTGGAAGTCGAATCTTCT 74647
Query 111247 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111306
||| | ||| | || || ||||||| ||||||||||| |||| || |||
Sbjct 74646 GATACCATTGATAACGTCAAGTCAAAAATTCAGGACAAAGAAGGTATTCCTCCGGACCAA 74587
Query 111307 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111366
|| ||| | |||| ||| || || ||| |||||||| || ||| || |||| || ||
Sbjct 74586 CAGAGGTTGATTTTTGCCGGTAAGCAACTGGAAGATGGTAGAACCTTGTCCGACTACAAC 74527
Query 111367 ATACAAAAAGAATCTACACTACATTTAGTGTT 111398
|| ||||| || || || |||||||||| ||
Sbjct 74526 ATCCAAAAGGAGTCCACTTTACATTTAGTATT 74495
Score = 109 bits (120), Expect = 5e-19
Identities = 152/213 (71%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246
|||||||||||||||||||| | || || ||||| || ||| | || ||| | |
Sbjct 74250 ATGCAAATTTTTGTCAAAACTCTAACTGGTAAAACTATAACCCTAGAGGTTGAATCTTCC 74191
Query 111247 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111306
|| || ||| | | || ||| || || |||||||| || | || ||||||
Sbjct 74190 GACACTATTGACAACGTCAAAAGTAAGATCCAAGACAAAGAGGGTATCCCACCAGATCAA 74131
Query 111307 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111366
||||| ||||||| ||| || || ||| ||||||| || ||| || | ||||||||
Sbjct 74130 CAAAGACTTATTTTTGCTGGTAAGCAACTGGAAGACGGTAGAACGCTGTCTGATTATAAC 74071
Query 111367 ATACAAAAAGAATCTACACTACATTTAGTGTTG 111399
|| || ||||||||||| | ||||||||| ||
Sbjct 74070 ATTCAGAAAGAATCTACTTTGCATTTAGTGCTG 74038
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246
||||| || ||||| || ||| |||| || || || || ||| | || ||| | |
Sbjct 74478 ATGCAGATCTTTGTTAAGACGCTGACTGGTAAGACTATAACCCTCGAGGTCGAATCTTCC 74419
Query 111247 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111306
|| | | | | | || || ||||||| ||||||||||| |||| || |||
Sbjct 74418 GACACGATCGACAACGTCAAGTCAAAAATTCAGGACAAAGAAGGTATTCCTCCGGACCAA 74359
Query 111307 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111366
|| ||| | |||| ||| || || ||| |||||||| || ||| || |||| || |||
Sbjct 74358 CAGAGGTTGATTTTTGCCGGTAAGCAACTGGAAGATGGTAGAACCTTGTCCGACTACAAT 74299
Query 111367 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111413
|| ||||| || ||||| || || ||||| ||| | || | |||||
Sbjct 74298 ATTCAAAAGGAGTCTACTCTCCACTTAGTCTTGAGATTGAGAGGTGG 74252
>seq9
Length=439147
Score = 84.2 bits (92), Expect = 2e-11
Identities = 150/219 (68%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 111195 TTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGCGATTCTGT 111254
||||||||| || |||| || || ||||| || ||||| ||| | || || |
Sbjct 64476 TTTTGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTAT 64535
Query 111255 TGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAACAAAGGCT 111314
|| | | || || ||| ||| ||||| ||||| | || || |||||||| |
Sbjct 64536 TGACAATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATT 64595
Query 111315 TATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAATATACAAAA 111374
|| | ||| || || ||||||||||| || ||| || | || ||||| || |||||
Sbjct 64596 GATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTATAACATTCAAAA 64655
Query 111375 AGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111413
|||||| || |||| ||||| ||| | || | |||||
Sbjct 64656 AGAATCCACTTTACACTTAGTCTTGAGATTGAGAGGTGG 64694
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 423039912351400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |