Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079175.1_202017-03- 21] 17 sequences; 11,929,789 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq14 123 5e-23 seq12 87.8 4e-12 >seq14 Length=769517 Score = 123 bits (136), Expect = 5e-23 Identities = 155/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 334142 ATCGTGTTCCACGTAAGCAGTTTTCAAAACATCCGCAGAGGGGAACCCTTCAAGCTGACC 334201 |||||||||||| ||| | || | |||| || |||||| || || | ||| || Sbjct 584126 ATCGTGTTCCACATAAACGGTGCGACACTCATCTTGAGTGGGGAAGCCATCGACCTGGCC 584067 Query 334202 GTTCACAATAGCGCGCATCAGAGTTGATTTACCCGCCCCGTTTGGCCCACACAGACCGTA 334261 || |||||| ||||| ||||| ||||| || || || ||||| ||||| ||||| || Sbjct 584066 ATTAGCAATAGATCGCATTAGAGTAGATTTTCCAGCACCATTTGGGCCACATAGACCATA 584007 Query 334262 GCGGTTTCCACGCTTCAGATTGAACCGCGTATTGTTCAGAAGAATTTTTCCACCATATGC 334321 | | || ||||||| | || | || ||||| || |||||||| |||||||||| Sbjct 584006 TCTTCTACCTCGCTTCAACCTCAATTGAGTCTTGTTTAGCAGAATTTTGGCACCATATGC 583947 Query 334322 CAGAGAAAATTCACAATCACACAGATCCTCACC 334354 || ||||||||||| | ||| | ||| ||||| Sbjct 583946 CAAGGAAAATTCACAGTTACATAAATCTTCACC 583914 >seq12 Length=1041178 Score = 87.8 bits (96), Expect = 4e-12 Identities = 123/173 (71%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 334182 GGGAACCCTTCAAGCTGACCGTTCACAATAGCGCGCATCAGAGTTGATTTACCCGCCCCG 334241 ||||| || |||| |||||||| ||||||| | ||| | ||| || ||||| ||| Sbjct 616473 GGGAAACCATCAACTTGACCGTTAGCAATAGCTCTCATTAAAGTGGACTTACCACAACCG 616414 Query 334242 TTTGGCCCACACAGACCGTAGCGGTTTCCACGCTTCAGATTGAACCGCGTATTGTTCAGA 334301 ||||| ||||| | ||| || | | | | ||||| | || | || || |||| Sbjct 616413 TTTGGACCACAGATACCATATCTTCTGGCTCTCTTCAATCTTAATTGGGTCTTATTCAAC 616354 Query 334302 AGAATTTTTCCACCATATGCCAGAGAAAATTCACAATCACACAGATCCTCACC 334354 | ||||| |||| || |||| |||||||||||| | ||| ||||| ||||| Sbjct 616353 AAGATTTTAGCACCGTAAGCCAAAGAAAATTCACAGTTACATAGATCTTCACC 616301 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102879759778950