Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079175.1_202017-03- 21] 17 sequences; 11,929,789 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq12 125 7e-24 seq9 91.5 1e-13 seq5 82.4 8e-11 >seq12 Length=1041178 Score = 125 bits (138), Expect = 7e-24 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 64235 ACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCA 64294 |||| ||| | || || || ||||| |||||||| || | | ||| | | ||||| Sbjct 74498 ACTAAATGTAAAGTGGACTCCTTTTGGATGTTGTAGTCGGACAAGGTTCTACCATCTTCC 74557 Query 64295 AGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGT 64354 || ||||| |||||| |||| | || ||| ||||| |||||||| |||||||| || || Sbjct 74558 AGTTGCTTACCGGCAAAAATCAACCTCTGTTGGTCCGGAGGAATACCTTCTTTGTCCTGA 74617 Query 64355 ATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTG 64414 |||||| ||| || || | |||||| | || ||||| | |||| ||| || Sbjct 74618 ATTTTTGACTTGACGTTATCAATGGTATCAGAAGATTCGACTTCCAATGTTATGGTTTTA 74677 Query 64415 CCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||||||||||| || || ||||||||||| Sbjct 74678 CCGGTCAAAGTCTTGACAAAAATTTGCAT 74706 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || | ||| || | || || || | || ||||| |||||||||||||| || | Sbjct 73795 ACCACCCCTCAACCTTAAGACCAGGTGGAGAGTAGATTCCTTTTGAATGTTGTAGTCGGA 73854 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | || | | ||||| || ||||| |||||| |||| | | ||| ||||| ||||| Sbjct 73855 TAACGTCCTGCCATCTTCCAGTTGCTTACCGGCAAAAATCAATCTCTGTTGGTCCGGAGG 73914 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 ||| ||||| || || || || || ||| || || | || || | || || Sbjct 73915 AATACCTTCCTTATCCTGAATCTTGCTCTTCACGTTATCAATAGTGTCGGACGATTCAAC 73974 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || | |||| |||||| || |||| || || || ||||||||||| Sbjct 73975 CTCGAGGGTTATGGTCTTACCCGTCAGTGTCTTAACAAAAATTTGCAT 74022 Score = 87.8 bits (96), Expect = 2e-12 Identities = 150/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 64226 AATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGC 64285 ||||| ||||||| ||| | || |||||||| |||||||| ||||| | | || | Sbjct 74033 AATCTCAGCACTAAATGCAAAGTAGATTCTTTCTGAATGTTATAATCAGACAGCGTTCTA 74092 Query 64286 GCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCT 64345 ||||||| || ||||| || ||| |||| || | || || || || || || || ||| Sbjct 74093 CCGTCTTCCAGTTGCTTACCAGCAAAAATAAGTCTTTGTTGATCTGGTGGGATACCCTCT 74152 Query 64346 TTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTT 64405 || ||||| || || || || || | || || | || || |||| ||| Sbjct 74153 TTGTCTTGGATCTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTT 74212 Query 64406 ACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 | || || || || | |||||| || ||||||||||| Sbjct 74213 ATAGTTTTACCAGTTAGAGTTTTGACAAAAATTTGCAT 74250 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || | |||||| | || | || | || ||||| ||||| |||||||| || | Sbjct 481500 ACCACCTCTCAATCTCAAGACCAAGTGCAAAGTGGATTCCTTTTGGATGTTGTAGTCAGA 481441 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | || | | ||||| | ||||| || ||| | || | | || ||||| || || Sbjct 481440 CAAAGTTCTGCCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGG 481381 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 || ||||| || ||||| || || ||| ||| || | || ||| | || || Sbjct 481380 GATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAAC 481321 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446 ||||| || | ||||| ||||| ||||| || |||||||||||||| || Sbjct 481320 TTCTAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATCTT 481270 >seq9 Length=439147 Score = 91.5 bits (100), Expect = 1e-13 Identities = 152/220 (69%), Gaps = 0/220 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || | |||||| | |||| || | || ||||||||||||||||| || || | Sbjct 64695 ACCACCTCTCAATCTCAAGACTAAGTGTAAAGTGGATTCTTTTTGAATGTTATAGTCAGA 64636 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | ||| | ||||||| | ||||| || ||| | || | | || ||||| || || Sbjct 64635 CAAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGG 64576 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 || ||||| || ||||| || ||| ||| ||| || | || ||| | || || Sbjct 64575 GATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAAC 64516 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAA 64435 ||| | ||| | |||||| || |||||||| || || ||| Sbjct 64515 TTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACAAAA 64476 >seq5 Length=1007496 Score = 82.4 bits (90), Expect = 8e-11 Identities = 201/302 (67%), Gaps = 2/302 (1%) Strand=Plus/Minus Query 155211 GCACAGTCCGCCAAAGTTTCGTACATTCCTTTGATGCTGTCTTCTTTCAACGTCAACAAG 155270 ||||| || |||||| ||||| || || | ||| ||| || |||| | | |||| Sbjct 296435 GCACATTCTTTCAAAGTGTCGTAAATACCCTCGATAGAGTCCTCCTTCATGGCGACCAAG 296376 Query 155271 AAACACGAAGATAATTGAGGTTGAGGGCAGCCGGCCGCAAATAATGTAGGACTAGCGTGT 155330 ||||| || || | |||||||| || || || ||| || || ||| || || Sbjct 296375 AAACAAGAGGACATTTGAGGTTTTGGAGTACCAGCATTAAACAAAGTTGGAGAGGCATGA 296316 Query 155331 GTAAAC-ATTTTGTTGGCGGTTAAGTTGTAAGTTTCGATGGCGGCGTCAATGTCACGACC 155389 ||||| ||||| | | ||||||| || ||||| | || || || ||||| | ||| Sbjct 296315 GTAAAGTATTTTAGAGACA-TTAAGTTATATGTTTCTAGAGCAGCTTCGATGTCTCTACC 296257 Query 155390 GTGTATACCGATCGCCACGCGCATCAGCATGTGTTGAATGCGCTCCGCAACGCGGCCGTT 155449 ||| || || | || || | ||| | | |||||| || || || || | ||||| Sbjct 296256 GTGGATGCCCAGTGCGACTCTCATAATTAAGTGTTGTGGACGTTCGGCCACTTGACCGTT 296197 Query 155450 GATGCGCTTTAAGTACCCATTTTCCAAAGTTTTATACGCAAAATACTTGTATTCGTAGTC 155509 ||| | ||| || | ||||||||||||| | ||||||| |||| | | | || Sbjct 296196 GATTCTTAGTAAATAAGAACGTTCCAAAGTTTTAAAACCAAAATAACTGTACTGGAAATC 296137 Query 155510 TC 155511 || Sbjct 296136 TC 296135 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499644693825480