Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079175.1_202017-03-
21] 17 sequences; 11,929,789 total letters
Query= NC_012639.1
Length=141291
Score E
Sequences producing significant alignments: (Bits) Value
seq12 131 2e-25
seq11 84.2 2e-11
>seq12
Length=1041178
Score = 131 bits (144), Expect = 2e-25
Identities = 162/219 (74%), Gaps = 2/219 (1%)
Strand=Plus/Plus
Query 45123 AGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTA 45182
|| || || |||| ||| | || || ||||||||||| || || ||| | |||| ||
Sbjct 74489 AGTCTTAATACTAAATGTAAAGTGGACTCCTTTTGGATGTTGTAGTCGGACAAGGTTCTA 74548
Query 45183 GAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCT 45242
||| |||| ||| || || || | ||||| | || |||||||| ||||| ||||||
Sbjct 74549 CCATCTTCCAGTTGCTTACCGGCAAAAATCAACCTCTGTTGGTCCGGAGGAATACCTTCT 74608
Query 45243 TTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGT 45301
|| || ||||||||| |||| || | || | ||| || ||||| |||||||| | ||
Sbjct 74609 TTGTCCTGAATTTTTGACTTGA-CGTTATCAATGGTATCAGAAGATTCGACTTCCAATGT 74667
Query 45302 AACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
| ||||| ||||| | ||| || ||||||||||||||
Sbjct 74668 TATGGTTTTACCGGTCAAAGTCTTGACAAAAATTTGCAT 74706
Score = 125 bits (138), Expect = 6e-24
Identities = 159/216 (74%), Gaps = 2/216 (1%)
Strand=Plus/Plus
Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185
||||| |||| || || || || |||||||| ||||| || ||| | |||| || |
Sbjct 74264 CTCAAGACTAAGTGGAGAGTAGACTCCTTTTGAATATTGTAGTCGGACAAGGTTCTACCA 74323
Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245
|| |||| ||| || || || | ||||| | || |||||||| ||||| ||||||||
Sbjct 74324 TCTTCCAGTTGCTTACCGGCAAAAATCAACCTCTGTTGGTCCGGAGGAATACCTTCTTTG 74383
Query 45246 TCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAAC 45304
|| ||||||||| |||| || | || | ||||||||||| ||||| ||||| || |
Sbjct 74384 TCCTGAATTTTTGACTTGA-CGTTGTCGATCGTGTCGGAAGATTCGACCTCGAGGGTTAT 74442
Query 45305 CGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| || || || || || || ||||| || |||||
Sbjct 74443 AGTCTTACCAGTCAGCGTCTTAACAAAGATCTGCAT 74478
Score = 113 bits (124), Expect = 4e-20
Identities = 156/216 (72%), Gaps = 2/216 (1%)
Strand=Plus/Plus
Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185
|||| ||||| ||||| || ||||| || || || |||||||| | ||| ||
Sbjct 74036 CTCAGCACTAAATGCAAAGTAGATTCTTTCTGAATGTTATAATCAGACAGCGTTCTACCG 74095
Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245
|| |||| ||| || || || | || | || ||| || || || || || || |||||
Sbjct 74096 TCTTCCAGTTGCTTACCAGCAAAAATAAGTCTTTGTTGATCTGGTGGGATACCCTCTTTG 74155
Query 45246 TCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAAC 45304
||||| || || ||||| || | || | ||||||||||| || || || || || |
Sbjct 74156 TCTTGGATCTTACTTTTGA-CGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTAT 74214
Query 45305 CGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
||||| || ||||||||||| ||||||||||||||
Sbjct 74215 AGTTTTACCAGTTAGAGTTTTGACAAAAATTTGCAT 74250
Score = 113 bits (124), Expect = 4e-20
Identities = 185/264 (70%), Gaps = 7/264 (3%)
Strand=Plus/Minus
Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185
||||| || | |||| || |||||||||||||| || || || | ||| | |
Sbjct 481487 CTCAAGACCAAGTGCAAAGTGGATTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTGCCA 481428
Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245
|| |||||||| || || || | ||||||| ||| ||||| || || || ||||| ||
Sbjct 481427 TCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTTG 481368
Query 45246 TCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACC 45305
||||| || || |||| || | ||||| ||||| || ||||| || ||||
Sbjct 481367 TCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCTAGGGTAATA 481308
Query 45306 GTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC---GC---GCGACCAATTTAATAA 45359
|| || ||||||| ||| || || |||||||||||| || || | || || | ||
Sbjct 481307 GTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATCTTGGCTTGTCGGCAAAATTTA-AA 481249
Query 45360 TTTAACTCTTATTTTCTTACTAAG 45383
||||||| | |||||||| |||
Sbjct 481248 TTTAACTGCTTCTTTCTTACCAAG 481225
Score = 100 bits (110), Expect = 3e-16
Identities = 154/217 (71%), Gaps = 2/217 (1%)
Strand=Plus/Plus
Query 45125 CCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGA 45184
||| || || || || || || ||||||||||| || || || ||| | || |
Sbjct 73807 CCTTAAGACCAGGTGGAGAGTAGATTCCTTTTGAATGTTGTAGTCGGATAACGTCCTGCC 73866
Query 45185 ATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTT 45244
||| |||| ||| || || || | ||||||| || |||||||| ||||| ||||| ||
Sbjct 73867 ATCTTCCAGTTGCTTACCGGCAAAAATCAATCTCTGTTGGTCCGGAGGAATACCTTCCTT 73926
Query 45245 ATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAA 45303
||| ||||| || || | || | || | |||||||| || || || ||||| || |
Sbjct 73927 ATCCTGAATCTTGCTCTTCA-CGTTATCAATAGTGTCGGACGATTCAACCTCGAGGGTTA 73985
Query 45304 CCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| || || || || || || ||||||||||||||
Sbjct 73986 TGGTCTTACCCGTCAGTGTCTTAACAAAAATTTGCAT 74022
>seq11
Length=681961
Score = 84.2 bits (92), Expect = 2e-11
Identities = 142/206 (69%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185
||||| || | ||| | || |||||||||||||| || || || | ||| ||
Sbjct 632829 CTCAAAACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGATAAAGTTCTACCG 632888
Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245
|| |||||||| || || || | ||||||| ||| ||||| || || || ||||| ||
Sbjct 632889 TCTTCCAATTGCTTACCGGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTTG 632948
Query 45246 TCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACC 45305
||||| || || |||| || | |||||| ||||| || ||||| | ||| |
Sbjct 632949 TCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCAACTTCTAAAGTGATG 633008
Query 45306 GTTTTGCCGGTTAGAGTTTTTACAAA 45331
|| || || || | ||| || || ||
Sbjct 633009 GTCTTACCAGTCAAAGTCTTAACGAA 633034
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 452003103949320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |