Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079175.1_202017-03-
21] 17 sequences; 11,929,789 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq5 176 6e-39
>seq5
Length=1007496
Score = 176 bits (194), Expect = 6e-39
Identities = 817/1287 (63%), Gaps = 26/1287 (2%)
Strand=Plus/Minus
Query 115903 TAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 115962
|| ||||| | ||| ||| ||||| || ||||| | |||||| ||||||| ||||||
Sbjct 297605 TACATGTTAGAGGTGACTGGTTCAAAACATTCATTATAACCCAATATTTGGGATGTGGAT 297546
Query 115963 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCC 116022
|| || ||||| ||||||||| | ||| | | ||| | | | || |
Sbjct 297545 GCAGTAGGCATTGGTGCCATGGTCAAAGAGTTTCTAATACCATGTTTCATGACATCTTTC 297486
Query 116023 TTGAGGGCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCCCTCCCACATATCAAACTGGAGG 116082
| | | |||||| || | || | | | ||||||||||| ||||| ||
Sbjct 297485 CTCAAAGTGTCCCAATCCCACATGCCGTAGGGTTTTTGGTCCCACATATCGAACTGAAGT 297426
Query 116083 ATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAAT 116142
|||||||| || ||||| || || | || || || |||||||| || | || |||
Sbjct 297425 ATACCTTGAGAAGCTGGAGAACCTTGGAAGGTTTCGTATGGGCCGTCCTTTTGAGCTAAT 297366
Query 116143 TCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCC 116202
|| | || || | || || ||||| ||||| ||||| || | ||| | |
Sbjct 297365 TCACAAGAAGCTTCCATGGAGGCATGATAAATTGTTTCAAAGATTTGGATATTTAGTAAA 297306
Query 116203 TTGGCCTCGTCGGAATCAAACGCGAGACGGCACAAAATAAATACATCCGCGAGACCTTGG 116262
|||||| || |||||||| | | ||| ||| ||||| || || | ||||||
Sbjct 297305 CGGGCCTCTTCAGAATCAAAGGGTAAACGTAGCAACATAAAAGTGTCAGCCAAACCTTGA 297246
Query 116263 ACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCACGGGATAA 116322
||||| | | ||||||| | |||||||||||| || ||| || || | ||| ||
Sbjct 297245 ACACCCAAGGCAATTGGCCTATGTCTCATATTGGATCTTCTCGCTTCTTCAATGGGGTAG 297186
Query 116323 AAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGC 116382
|||| | ||| ||||| || |||| ||| || ||||| || | ||||| || |
Sbjct 297185 TAATTACGATCAATAACTCTGTTTAAATTACGAGTAACAACTTTGGCAATTTCGTGTAAT 297126
Query 116383 TTTTCGTAATCAAAACTGCGAGTCT---CTTCAT-TGACAT--------ACTTAGGAAGG 116430
|||| | | | || | ||| | | || | |||| | || || | |
Sbjct 297125 TTTTTGAAGTTGTAAGTAGAAGTTTGGCCGTCCTCTGACGTTTCAATGAACGCTGGCAAG 297066
Query 116431 GCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCC 116490
|| | || |||| ||||| |||| || || ||| | | | |||||| | ||||||
Sbjct 297065 GCAACGGAAGCCAAGTTACAAACAGCAGTTTCGTCCGGAGCTGAGTACTCAACAATTTCA 297006
Query 116491 GTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACAC 116550
|| || || || ||| || |||||||| ||||| || |||||| |||| ||
Sbjct 297005 CAGCATAAGTTCGATGACTTGATAACACCCAAGTTTTTTTGGTTAGACTTTCTGTTGCAA 296946
Query 116551 GCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTC 116610
|||||||| || | || | | || || || || || ||||| | | | ||| | | |
Sbjct 296945 GCATCCTTATAAACCACAAAAGGTGTACCAGTTTCAGTTTGTGCTTCCAAAATGGAATAC 296886
Query 116611 CATACATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAG 116670
|||| | ||| | ||| || | || || || | ||||| || ||
Sbjct 296885 CATAATTTTTGAGCT---TTAATGGTCTTACCACGACCTTCTTTTTCGTAGCGGGTATAT 296829
Query 116671 AGGGCCTCAAACTCTTCACC--CACAGCCTCTGAGAGCCCTGGTGCCTTATCTGGACAGA 116728
|| || ||||| || ||||| |||| | || ||| || || || |||| |||
Sbjct 296828 AGAGCTTCAAAATCGTCACCGTAACAGTCGCTTAGA--CCGGGAGCTGCTGTTGGAGAGA 296771
Query 116729 AGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCG 116788
| | || ||| ||| || || || || |||||||| || || || ||||| || |
Sbjct 296770 ACAAAGTCCAAGTCCCATTTTCTTCGACACGTTTCATGAAAAGATCAGGAATCCACAGAG 296711
Query 116789 CCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAA 116848
| | || | ||| | ||| |||||| | || || || | | || | ||
Sbjct 296710 CAGGAAACAAATCTCTTGCACGAATTTCTTCTTTACCGTGGTTCTTTCTGATATCAATAA 296651
Query 116849 AGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTG-ACC---CCTTGCGA 116904
| || | |||||| || ||||| ||||||||||||| || | | ||| ||| |
Sbjct 296650 AATCAAAGATATCAGCATGCCATGGTTCCAGGTACAGAGCAAAGGCACCAGGTCTTTTG- 296592
Query 116905 CGACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAATGATA 116964
|||| |||||| ||||| | || || ||||| || |||| ||| ||||| |
Sbjct 296591 TTACCACCCTGGTCGACATAACGGGCGGTATTATTAAAAACACGAATCATGGGAATTAAC 296532
Query 116965 CCATCAGATTGGCCATTTGTCCCCCGAATACGAG-ACTTGTTGGCTCTGACATCGTGGAT 117023
|| | ||| |||||||| || ||| || || ||| | | | | || ||
Sbjct 296531 CCGTTAGAAGTACCATTTGTACCAGCAATGTAAGAACCAGTT-GAACGAATGTTATGAAT 296473
Query 117024 GTGCATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTGCCGTA 117083
|| | ||||||||| || || || || || || || || | | | || ||||
Sbjct 296472 ATGTAGACCAATACCACCAGCAGTTTTGGAAATCAAAGCACATTCTTTCAAAGTGTCGTA 296413
Query 117084 GATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGTGGCCT 117143
|| || ||||| ||||| |||| | |||| | ||| || |||||||| || |
Sbjct 296412 AATACCCTCGATAGAGTCCTCCTTCATGGCGACCAAGAAACAAGAGGACATTTGAGGTTT 296353
Query 117144 TGGTGTACCAGCGTTGAAGAGGGTTGG 117170
||| |||||||| || || | |||||
Sbjct 296352 TGGAGTACCAGCATTAAACAAAGTTGG 296326
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613507069629720
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