Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079175.1_202017-03- 21] 17 sequences; 11,929,789 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq5 176 6e-39 >seq5 Length=1007496 Score = 176 bits (194), Expect = 6e-39 Identities = 817/1287 (63%), Gaps = 26/1287 (2%) Strand=Plus/Minus Query 115903 TAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 115962 || ||||| | ||| ||| ||||| || ||||| | |||||| ||||||| |||||| Sbjct 297605 TACATGTTAGAGGTGACTGGTTCAAAACATTCATTATAACCCAATATTTGGGATGTGGAT 297546 Query 115963 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCC 116022 || || ||||| ||||||||| | ||| | | ||| | | | || | Sbjct 297545 GCAGTAGGCATTGGTGCCATGGTCAAAGAGTTTCTAATACCATGTTTCATGACATCTTTC 297486 Query 116023 TTGAGGGCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCCCTCCCACATATCAAACTGGAGG 116082 | | | |||||| || | || | | | ||||||||||| ||||| || Sbjct 297485 CTCAAAGTGTCCCAATCCCACATGCCGTAGGGTTTTTGGTCCCACATATCGAACTGAAGT 297426 Query 116083 ATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAAT 116142 |||||||| || ||||| || || | || || || |||||||| || | || ||| Sbjct 297425 ATACCTTGAGAAGCTGGAGAACCTTGGAAGGTTTCGTATGGGCCGTCCTTTTGAGCTAAT 297366 Query 116143 TCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCC 116202 || | || || | || || ||||| ||||| ||||| || | ||| | | Sbjct 297365 TCACAAGAAGCTTCCATGGAGGCATGATAAATTGTTTCAAAGATTTGGATATTTAGTAAA 297306 Query 116203 TTGGCCTCGTCGGAATCAAACGCGAGACGGCACAAAATAAATACATCCGCGAGACCTTGG 116262 |||||| || |||||||| | | ||| ||| ||||| || || | |||||| Sbjct 297305 CGGGCCTCTTCAGAATCAAAGGGTAAACGTAGCAACATAAAAGTGTCAGCCAAACCTTGA 297246 Query 116263 ACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCACGGGATAA 116322 ||||| | | ||||||| | |||||||||||| || ||| || || | ||| || Sbjct 297245 ACACCCAAGGCAATTGGCCTATGTCTCATATTGGATCTTCTCGCTTCTTCAATGGGGTAG 297186 Query 116323 AAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGC 116382 |||| | ||| ||||| || |||| ||| || ||||| || | ||||| || | Sbjct 297185 TAATTACGATCAATAACTCTGTTTAAATTACGAGTAACAACTTTGGCAATTTCGTGTAAT 297126 Query 116383 TTTTCGTAATCAAAACTGCGAGTCT---CTTCAT-TGACAT--------ACTTAGGAAGG 116430 |||| | | | || | ||| | | || | |||| | || || | | Sbjct 297125 TTTTTGAAGTTGTAAGTAGAAGTTTGGCCGTCCTCTGACGTTTCAATGAACGCTGGCAAG 297066 Query 116431 GCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCC 116490 || | || |||| ||||| |||| || || ||| | | | |||||| | |||||| Sbjct 297065 GCAACGGAAGCCAAGTTACAAACAGCAGTTTCGTCCGGAGCTGAGTACTCAACAATTTCA 297006 Query 116491 GTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACAC 116550 || || || || ||| || |||||||| ||||| || |||||| |||| || Sbjct 297005 CAGCATAAGTTCGATGACTTGATAACACCCAAGTTTTTTTGGTTAGACTTTCTGTTGCAA 296946 Query 116551 GCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTC 116610 |||||||| || | || | | || || || || || ||||| | | | ||| | | | Sbjct 296945 GCATCCTTATAAACCACAAAAGGTGTACCAGTTTCAGTTTGTGCTTCCAAAATGGAATAC 296886 Query 116611 CATACATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAG 116670 |||| | ||| | ||| || | || || || | ||||| || || Sbjct 296885 CATAATTTTTGAGCT---TTAATGGTCTTACCACGACCTTCTTTTTCGTAGCGGGTATAT 296829 Query 116671 AGGGCCTCAAACTCTTCACC--CACAGCCTCTGAGAGCCCTGGTGCCTTATCTGGACAGA 116728 || || ||||| || ||||| |||| | || ||| || || || |||| ||| Sbjct 296828 AGAGCTTCAAAATCGTCACCGTAACAGTCGCTTAGA--CCGGGAGCTGCTGTTGGAGAGA 296771 Query 116729 AGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCG 116788 | | || ||| ||| || || || || |||||||| || || || ||||| || | Sbjct 296770 ACAAAGTCCAAGTCCCATTTTCTTCGACACGTTTCATGAAAAGATCAGGAATCCACAGAG 296711 Query 116789 CCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAA 116848 | | || | ||| | ||| |||||| | || || || | | || | || Sbjct 296710 CAGGAAACAAATCTCTTGCACGAATTTCTTCTTTACCGTGGTTCTTTCTGATATCAATAA 296651 Query 116849 AGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTG-ACC---CCTTGCGA 116904 | || | |||||| || ||||| ||||||||||||| || | | ||| ||| | Sbjct 296650 AATCAAAGATATCAGCATGCCATGGTTCCAGGTACAGAGCAAAGGCACCAGGTCTTTTG- 296592 Query 116905 CGACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAATGATA 116964 |||| |||||| ||||| | || || ||||| || |||| ||| ||||| | Sbjct 296591 TTACCACCCTGGTCGACATAACGGGCGGTATTATTAAAAACACGAATCATGGGAATTAAC 296532 Query 116965 CCATCAGATTGGCCATTTGTCCCCCGAATACGAG-ACTTGTTGGCTCTGACATCGTGGAT 117023 || | ||| |||||||| || ||| || || ||| | | | | || || Sbjct 296531 CCGTTAGAAGTACCATTTGTACCAGCAATGTAAGAACCAGTT-GAACGAATGTTATGAAT 296473 Query 117024 GTGCATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTGCCGTA 117083 || | ||||||||| || || || || || || || || | | | || |||| Sbjct 296472 ATGTAGACCAATACCACCAGCAGTTTTGGAAATCAAAGCACATTCTTTCAAAGTGTCGTA 296413 Query 117084 GATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGTGGCCT 117143 || || ||||| ||||| |||| | |||| | ||| || |||||||| || | Sbjct 296412 AATACCCTCGATAGAGTCCTCCTTCATGGCGACCAAGAAACAAGAGGACATTTGAGGTTT 296353 Query 117144 TGGTGTACCAGCGTTGAAGAGGGTTGG 117170 ||| |||||||| || || | ||||| Sbjct 296352 TGGAGTACCAGCATTAAACAAAGTTGG 296326 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613507069629720