Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079175.1_202017-03- 21] 17 sequences; 11,929,789 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq12 149 1e-30 seq11 95.1 3e-14 >seq12 Length=1041178 Score = 149 bits (164), Expect = 1e-30 Identities = 157/207 (76%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 199420 GACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTC 199479 ||| ||||||||||| || |||||||| | ||||||||| | || ||||| |||||||| Sbjct 73813 GACCAGGTGGAGAGTAGATTCCTTTTGAATGTTGTAGTCGGATAACGTCCTGCCATCTTC 73872 Query 199480 CAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTG 199539 ||| ||||| ||||| || || | | ||| ||||||||| ||| ||||| ||||| Sbjct 73873 CAGTTGCTTACCGGCAAAAATCAATCTCTGTTGGTCCGGAGGAATACCTTCCTTATCCTG 73932 Query 199540 AATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTT 199599 |||||| ||||||| || | ||||| | | ||| || || | || || ||||| Sbjct 73933 AATCTTGCTCTTCACGTTATCAATAGTGTCGGACGATTCAACCTCGAGGGTTATGGTCTT 73992 Query 199600 ACCCGTGAGAGTTTTCACAAAAATTTG 199626 |||||| || || || ||||||||||| Sbjct 73993 ACCCGTCAGTGTCTTAACAAAAATTTG 74019 Score = 141 bits (156), Expect = 2e-28 Identities = 159/213 (75%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473 ||||| ||| | ||||||||| ||||||||||| | |||||||| | ||| || || || Sbjct 74263 TCTCAAGACTAAGTGGAGAGTAGACTCCTTTTGAATATTGTAGTCGGACAAGGTTCTACC 74322 Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533 ||||||||| ||||| ||||| || || | | ||| ||||||||| ||| |||||| Sbjct 74323 ATCTTCCAGTTGCTTACCGGCAAAAATCAACCTCTGTTGGTCCGGAGGAATACCTTCTTT 74382 Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593 |||||||| ||| ||| ||| |||| ||||| | | ||| || || | || || Sbjct 74383 GTCCTGAATTTTTGACTTGACGTTGTCGATCGTGTCGGAAGATTCGACCTCGAGGGTTAT 74442 Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 |||||||| || || || || ||||| || || Sbjct 74443 AGTCTTACCAGTCAGCGTCTTAACAAAGATCTG 74475 Score = 140 bits (154), Expect = 8e-28 Identities = 148/195 (76%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 199432 AGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCC 199491 ||| ||||||||||||| ||||||||| | ||| || || ||||||||||| ||||| || Sbjct 74509 AGTGGACTCCTTTTGGATGTTGTAGTCGGACAAGGTTCTACCATCTTCCAGTTGCTTACC 74568 Query 199492 GGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTT 199551 ||| || || | | ||| ||||||||| ||| |||||| |||||||| ||| ||| Sbjct 74569 GGCAAAAATCAACCTCTGTTGGTCCGGAGGAATACCTTCTTTGTCCTGAATTTTTGACTT 74628 Query 199552 CACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGT 199611 ||| || | ||| || | | ||| || ||||| || || || ||||| || | ||| Sbjct 74629 GACGTTATCAATGGTATCAGAAGATTCGACTTCCAATGTTATGGTTTTACCGGTCAAAGT 74688 Query 199612 TTTCACAAAAATTTG 199626 || ||||||||||| Sbjct 74689 CTTGACAAAAATTTG 74703 Score = 105 bits (116), Expect = 2e-17 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473 ||||| ||| | ||| | ||| || |||||||||| ||||||||||| |||||| || || Sbjct 481488 TCTCAAGACCAAGTGCAAAGTGGATTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTGCC 481429 Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533 |||||||| ||||| || || ||||| | | || ||||| || || ||||| Sbjct 481428 ATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTT 481369 Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593 || || ||||| ||| || || | ||||| | | ||| || || | || || Sbjct 481368 GTCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCTAGGGTAAT 481309 Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 |||||||| || | ||| || || |||||||| Sbjct 481308 AGTCTTACCGGTTAAAGTCTTGACGAAAATTTG 481276 >seq11 Length=681961 Score = 95.1 bits (104), Expect = 3e-14 Identities = 145/207 (70%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473 ||||| || | || | ||| || |||||||||| ||||||||||| ||||| || || Sbjct 632828 TCTCAAAACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGATAAAGTTCTACC 632887 Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533 ||||||| ||||| ||||| ||||| | | || ||||| || || ||||| Sbjct 632888 GTCTTCCAATTGCTTACCGGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTT 632947 Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593 || || ||||| ||| || || | |||||| | | ||| || || || ||||| Sbjct 632948 GTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCAACTTCTAAAGTGAT 633007 Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAA 199620 |||||||| || | ||| || || || Sbjct 633008 GGTCTTACCAGTCAAAGTCTTAACGAA 633034 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178921343216139