Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079175.1_202017-03-
21] 17 sequences; 11,929,789 total letters
Query= NC_013756.1
Length=368454
Score E
Sequences producing significant alignments: (Bits) Value
seq12 149 1e-30
seq11 95.1 3e-14
>seq12
Length=1041178
Score = 149 bits (164), Expect = 1e-30
Identities = 157/207 (76%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 199420 GACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTC 199479
||| ||||||||||| || |||||||| | ||||||||| | || ||||| ||||||||
Sbjct 73813 GACCAGGTGGAGAGTAGATTCCTTTTGAATGTTGTAGTCGGATAACGTCCTGCCATCTTC 73872
Query 199480 CAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTG 199539
||| ||||| ||||| || || | | ||| ||||||||| ||| ||||| |||||
Sbjct 73873 CAGTTGCTTACCGGCAAAAATCAATCTCTGTTGGTCCGGAGGAATACCTTCCTTATCCTG 73932
Query 199540 AATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTT 199599
|||||| ||||||| || | ||||| | | ||| || || | || || |||||
Sbjct 73933 AATCTTGCTCTTCACGTTATCAATAGTGTCGGACGATTCAACCTCGAGGGTTATGGTCTT 73992
Query 199600 ACCCGTGAGAGTTTTCACAAAAATTTG 199626
|||||| || || || |||||||||||
Sbjct 73993 ACCCGTCAGTGTCTTAACAAAAATTTG 74019
Score = 141 bits (156), Expect = 2e-28
Identities = 159/213 (75%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473
||||| ||| | ||||||||| ||||||||||| | |||||||| | ||| || || ||
Sbjct 74263 TCTCAAGACTAAGTGGAGAGTAGACTCCTTTTGAATATTGTAGTCGGACAAGGTTCTACC 74322
Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533
||||||||| ||||| ||||| || || | | ||| ||||||||| ||| ||||||
Sbjct 74323 ATCTTCCAGTTGCTTACCGGCAAAAATCAACCTCTGTTGGTCCGGAGGAATACCTTCTTT 74382
Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593
|||||||| ||| ||| ||| |||| ||||| | | ||| || || | || ||
Sbjct 74383 GTCCTGAATTTTTGACTTGACGTTGTCGATCGTGTCGGAAGATTCGACCTCGAGGGTTAT 74442
Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|||||||| || || || || ||||| || ||
Sbjct 74443 AGTCTTACCAGTCAGCGTCTTAACAAAGATCTG 74475
Score = 140 bits (154), Expect = 8e-28
Identities = 148/195 (76%), Gaps = 0/195 (0%)
Strand=Plus/Plus
Query 199432 AGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCC 199491
||| ||||||||||||| ||||||||| | ||| || || ||||||||||| ||||| ||
Sbjct 74509 AGTGGACTCCTTTTGGATGTTGTAGTCGGACAAGGTTCTACCATCTTCCAGTTGCTTACC 74568
Query 199492 GGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTT 199551
||| || || | | ||| ||||||||| ||| |||||| |||||||| ||| |||
Sbjct 74569 GGCAAAAATCAACCTCTGTTGGTCCGGAGGAATACCTTCTTTGTCCTGAATTTTTGACTT 74628
Query 199552 CACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGT 199611
||| || | ||| || | | ||| || ||||| || || || ||||| || | |||
Sbjct 74629 GACGTTATCAATGGTATCAGAAGATTCGACTTCCAATGTTATGGTTTTACCGGTCAAAGT 74688
Query 199612 TTTCACAAAAATTTG 199626
|| |||||||||||
Sbjct 74689 CTTGACAAAAATTTG 74703
Score = 105 bits (116), Expect = 2e-17
Identities = 151/213 (71%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473
||||| ||| | ||| | ||| || |||||||||| ||||||||||| |||||| || ||
Sbjct 481488 TCTCAAGACCAAGTGCAAAGTGGATTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTGCC 481429
Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533
|||||||| ||||| || || ||||| | | || ||||| || || |||||
Sbjct 481428 ATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTT 481369
Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593
|| || ||||| ||| || || | ||||| | | ||| || || | || ||
Sbjct 481368 GTCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCTAGGGTAAT 481309
Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|||||||| || | ||| || || ||||||||
Sbjct 481308 AGTCTTACCGGTTAAAGTCTTGACGAAAATTTG 481276
>seq11
Length=681961
Score = 95.1 bits (104), Expect = 3e-14
Identities = 145/207 (70%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473
||||| || | || | ||| || |||||||||| ||||||||||| ||||| || ||
Sbjct 632828 TCTCAAAACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGATAAAGTTCTACC 632887
Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533
||||||| ||||| ||||| ||||| | | || ||||| || || |||||
Sbjct 632888 GTCTTCCAATTGCTTACCGGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTT 632947
Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593
|| || ||||| ||| || || | |||||| | | ||| || || || |||||
Sbjct 632948 GTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCAACTTCTAAAGTGAT 633007
Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAA 199620
|||||||| || | ||| || || ||
Sbjct 633008 GGTCTTACCAGTCAAAGTCTTAACGAA 633034
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1178921343216139
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |