Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079175.1_202017-03-
21] 17 sequences; 11,929,789 total letters
Query= NC_013772.1
Length=176677
Score E
Sequences producing significant alignments: (Bits) Value
seq12 104 3e-17
seq11 93.3 5e-14
>seq12
Length=1041178
Score = 104 bits (114), Expect = 3e-17
Identities = 161/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 46364 TTGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCG 46423
|| || || || || | || ||||| || | ||| |||||||| || |||||||||
Sbjct 73793 TTACCACCCCTCAACCTTAAGACCAGGTGGAGAGTAGATTCCTTTTGAATGTTGTAGTCG 73852
Query 46424 GATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCC 46483
|||| || | | || || || ||||| ||||| || ||||| | ||| ||||| |
Sbjct 73853 GATAACGTCCTGCCATCTTCCAGTTGCTTACCGGCAAAAATCAATCTCTGTTGGTCCGGA 73912
Query 46484 GGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCC 46543
|| | | ||||| ||| ||||| |||| | | | | |||||| ||||||
Sbjct 73913 GGAATACCTTCCTTATCCTGAATCTTGCTCTTCACGTTATCAATAGTGTCGGACGATTCA 73972
Query 46544 ACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|| || | || ||||| || |||||||| || |||||||| ||||||||
Sbjct 73973 ACCTCGAGGGTTATGGTCTTACCCGTCAGTGTCTTAACAAAAATTTGCAT 74022
Score = 102 bits (112), Expect = 9e-17
Identities = 161/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426
|| ||||| || | ||| || | || | ||| ||||||||| ||||||||||||||
Sbjct 74252 CCACCTCTCAATCTCAAGACTAAGTGGAGAGTAGACTCCTTTTGAATATTGTAGTCGGAC 74311
Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486
| || | | || || || ||||| ||||| || ||||| | ||| ||||| | ||
Sbjct 74312 AAGGTTCTACCATCTTCCAGTTGCTTACCGGCAAAAATCAACCTCTGTTGGTCCGGAGGA 74371
Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCAC 46545
| | || |||||| || || ||||| ||| | | | ||||||| ||||| ||
Sbjct 74372 ATACCTTCTTTGTCCTGAATTTTTGACTTGA-CGTTGTCGATCGTGTCGGAAGATTCGAC 74430
Query 46546 ATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|| | || || || || || |||||||| ||||||||||| |||||
Sbjct 74431 CTCGAGGGTTATAGTCTTACCAGTCAGCGTCTTAACAAAGATCTGCAT 74478
Score = 86.0 bits (94), Expect = 7e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426
|| ||||||| | || || | ||| || || |||||||||||| |||||||||||
Sbjct 74480 CCACCTCTTAGTCTTAATACTAAATGTAAAGTGGACTCCTTTTGGATGTTGTAGTCGGAC 74539
Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486
| || | | || || || ||||| ||||| || ||||| | ||| ||||| | ||
Sbjct 74540 AAGGTTCTACCATCTTCCAGTTGCTTACCGGCAAAAATCAACCTCTGTTGGTCCGGAGGA 74599
Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 46546
| | || |||||| || || ||||| | | | || || ||||| ||
Sbjct 74600 ATACCTTCTTTGTCCTGAATTTTTGACTTGACGTTATCAATGGTATCAGAAGATTCGACT 74659
Query 46547 TCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|||| || |||||||| || |||| || || ||||| ||||||||
Sbjct 74660 TCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACAAAAATTTGCAT 74706
>seq11
Length=681961
Score = 93.3 bits (102), Expect = 5e-14
Identities = 152/219 (69%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426
|| |||||||| | ||| |||| ||| || || ||||||||||| |||||||| |||
Sbjct 632817 CCACCTCTTAATCTCAAAACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGAT 632876
Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486
| ||| | |||| || | ||||| ||||| || ||||| | || ||||| | ||
Sbjct 632877 AAAGTTCTACCGTCTTCCAATTGCTTACCGGCAAAGATCAATCTTTGTTGGTCAGGTGGG 632936
Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 46546
| | |||||||| |||||| ||||| | | | ||||| ||||| ||
Sbjct 632937 ATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCAACT 632996
Query 46547 TCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAG 46585
|| | |||||||| || || |||| || ||||| |||
Sbjct 632997 TCTAAAGTGATGGTCTTACCAGTCAAAGTCTTAACGAAG 633035
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 565238279886840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |