Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079175.1_202017-03- 21] 17 sequences; 11,929,789 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq12 104 3e-17 seq11 93.3 5e-14 >seq12 Length=1041178 Score = 104 bits (114), Expect = 3e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 46364 TTGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCG 46423 || || || || || | || ||||| || | ||| |||||||| || ||||||||| Sbjct 73793 TTACCACCCCTCAACCTTAAGACCAGGTGGAGAGTAGATTCCTTTTGAATGTTGTAGTCG 73852 Query 46424 GATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCC 46483 |||| || | | || || || ||||| ||||| || ||||| | ||| ||||| | Sbjct 73853 GATAACGTCCTGCCATCTTCCAGTTGCTTACCGGCAAAAATCAATCTCTGTTGGTCCGGA 73912 Query 46484 GGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCC 46543 || | | ||||| ||| ||||| |||| | | | | |||||| |||||| Sbjct 73913 GGAATACCTTCCTTATCCTGAATCTTGCTCTTCACGTTATCAATAGTGTCGGACGATTCA 73972 Query 46544 ACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || || | || ||||| || |||||||| || |||||||| |||||||| Sbjct 73973 ACCTCGAGGGTTATGGTCTTACCCGTCAGTGTCTTAACAAAAATTTGCAT 74022 Score = 102 bits (112), Expect = 9e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 || ||||| || | ||| || | || | ||| ||||||||| |||||||||||||| Sbjct 74252 CCACCTCTCAATCTCAAGACTAAGTGGAGAGTAGACTCCTTTTGAATATTGTAGTCGGAC 74311 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 | || | | || || || ||||| ||||| || ||||| | ||| ||||| | || Sbjct 74312 AAGGTTCTACCATCTTCCAGTTGCTTACCGGCAAAAATCAACCTCTGTTGGTCCGGAGGA 74371 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCAC 46545 | | || |||||| || || ||||| ||| | | | ||||||| ||||| || Sbjct 74372 ATACCTTCTTTGTCCTGAATTTTTGACTTGA-CGTTGTCGATCGTGTCGGAAGATTCGAC 74430 Query 46546 ATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || | || || || || || |||||||| ||||||||||| ||||| Sbjct 74431 CTCGAGGGTTATAGTCTTACCAGTCAGCGTCTTAACAAAGATCTGCAT 74478 Score = 86.0 bits (94), Expect = 7e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 || ||||||| | || || | ||| || || |||||||||||| ||||||||||| Sbjct 74480 CCACCTCTTAGTCTTAATACTAAATGTAAAGTGGACTCCTTTTGGATGTTGTAGTCGGAC 74539 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 | || | | || || || ||||| ||||| || ||||| | ||| ||||| | || Sbjct 74540 AAGGTTCTACCATCTTCCAGTTGCTTACCGGCAAAAATCAACCTCTGTTGGTCCGGAGGA 74599 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 46546 | | || |||||| || || ||||| | | | || || ||||| || Sbjct 74600 ATACCTTCTTTGTCCTGAATTTTTGACTTGACGTTATCAATGGTATCAGAAGATTCGACT 74659 Query 46547 TCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 |||| || |||||||| || |||| || || ||||| |||||||| Sbjct 74660 TCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACAAAAATTTGCAT 74706 >seq11 Length=681961 Score = 93.3 bits (102), Expect = 5e-14 Identities = 152/219 (69%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 || |||||||| | ||| |||| ||| || || ||||||||||| |||||||| ||| Sbjct 632817 CCACCTCTTAATCTCAAAACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGAT 632876 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 | ||| | |||| || | ||||| ||||| || ||||| | || ||||| | || Sbjct 632877 AAAGTTCTACCGTCTTCCAATTGCTTACCGGCAAAGATCAATCTTTGTTGGTCAGGTGGG 632936 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 46546 | | |||||||| |||||| ||||| | | | ||||| ||||| || Sbjct 632937 ATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCAACT 632996 Query 46547 TCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAG 46585 || | |||||||| || || |||| || ||||| ||| Sbjct 632997 TCTAAAGTGATGGTCTTACCAGTCAAAGTCTTAACGAAG 633035 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565238279886840